#include 
#include 
#include 
#include 
#include 
#include 

#ifdef USE_HDF5
#include "hdf5.h"
#endif  // USE_HDF5

#include "caffe/common.hpp"
#include "caffe/layer.hpp"
#include "caffe/net.hpp"
#include "caffe/parallel.hpp"
#include "caffe/proto/caffe.pb.h"
#include "caffe/util/hdf5.hpp"
#include "caffe/util/insert_splits.hpp"
#include "caffe/util/math_functions.hpp"
#include "caffe/util/upgrade_proto.hpp"

namespace caffe {

template 
Net::Net(const NetParameter& param) {
  Init(param);
}

template 
Net::Net(const string& param_file, Phase phase,
    const int level, const vector* stages) {
  NetParameter param;
  ReadNetParamsFromTextFileOrDie(param_file, ¶m);
  // Set phase, stages and level
  param.mutable_state()->set_phase(phase);
  if (stages != NULL) {
    for (int i = 0; i < stages->size(); i++) {
      param.mutable_state()->add_stage((*stages)[i]);
    }
  }
  param.mutable_state()->set_level(level);
  Init(param);
}

template 
void Net::Init(const NetParameter& in_param) {
  // Set phase from the state.
  phase_ = in_param.state().phase();
  // Filter layers based on their include/exclude rules and
  // the current NetState.
  NetParameter filtered_param;
  FilterNet(in_param, &filtered_param);
  LOG_IF(INFO, Caffe::root_solver())
      SetUp(bottom_vecs_[layer_id], top_vecs_[layer_id]);
    LOG_IF(INFO, Caffe::root_solver())
        has_lr_mult());
    has_params_decay_.push_back(param_spec->has_decay_mult());
    params_lr_.push_back(param_spec->lr_mult());
    params_weight_decay_.push_back(param_spec->decay_mult());
  } else {
    // Named param blob with name we've seen before: share params
    const int owner_net_param_id = param_names_index_[param_name];
    param_owners_.push_back(owner_net_param_id);
    const pair& owner_index =
        param_layer_indices_[owner_net_param_id];
    const int owner_layer_id = owner_index.first;
    const int owner_param_id = owner_index.second;
    LOG_IF(INFO, Caffe::root_solver())