plasma-python/examples/pbs.cmd at master · PPPLDeepLearning/plasma-python · GitHub

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#!/bin/bash

#PBS -A FUS117

#PBS -l walltime=0:05:00

#PBS -l nodes=2

##PBS -l procs=1

##PBS -l gres=atlas1%atlas2

#Cannot see home folder, will just hang until wall limit

export HOME=/ccs/proj/fus117/

cd $HOME/PPPL/plasma-python/examples

source $MODULESHOME/init/bash

module switch PrgEnv-pgi PrgEnv-gnu

module load cudatoolkit

export LIBRARY_PATH=/opt/nvidia/cudatoolkit7.5/7.5.18-1.0502.10743.2.1/lib64:$LIBRARY_PATH

#This block is CuDNN module

export LD_LIBRARY_PATH=$HOME/cuda/lib64:$LD_LIBRARY_PATH

export LIBRARY_PATH=$HOME/cuda/lib64:$LIBRARY_PATH

export LDFLAGS=$LDFLAGS:$HOME/cuda/lib64

export INCLUDE=$INCLUDE:$HOME/cuda/include

export CPATH=$CPATH:$HOME/cuda/include

export FFLAGS=$FFLAGS:$HOME/cuda/include

export LOCAL_LDFLAGS=$LOCAL_LDFLAGS:$HOME/cuda/lib64

export LOCAL_INCLUDE=$LOCAL_INCLUDE:$HOME/cuda/include

export LOCAL_CFLAGS=$LOCAL_CFLAGS:$HOME/cuda/include

export LOCAL_FFLAGS=$LOCAL_FFLAGS:$HOME/cuda/include

export LOCAL_CXXFLAGS=$LOCAL_CXXFLAGS:$HOME/cuda/include

#This sets new home and Anaconda module

export PATH=$HOME/anaconda2/bin:$PATH

export LD_LIBRARY_PATH=$HOME/anaconda2/lib:$LD_LIBRARY_PATH

source activate PPPL

PYTHON=`which python`

echo $PYTHON

#pygpu backend

#export CPATH=$CPATH:~/.local/include

#export LIBRARY_PATH=$LIBRARY_PATH:~/.local/lib

#export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:~/.local/lib

export LD_LIBRARY_PATH=$CRAY_LD_LIBRARY_PATH:$LD_LIBRARY_PATH

export MPICH_RDMA_ENABLED_CUDA=1

rm $HOME/tigress/alexeys/model_checkpoints/*

aprun -n2 -N1 $PYTHON mpi_learn.py

plasma-python/examples/pbs.cmd at master · PPPLDeepLearning/plasma-python · GitHub

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