CRootBox/python/example3e.py at master · Plant-Root-Soil-Interactions-Modelling/CRootBox · GitHub

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"""increase axial resolution (e.g. for animation)"""

import py_rootbox as rb

rs = rb.RootSystem()

# Open plant and root parameter from a file

name = "Anagallis_femina_Leitner_2010"

rs.readParameters("modelparameter/" + name + ".xml")

# Set Geometry

soilcore = rb.SDF_PlantContainer(5, 5, 40, False)

rs.setGeometry(soilcore)

# Modify axial resolution

for p in rs.getRootTypeParameter():

p.dx = 0.1 # adjust resolution

# Simulate

rs.initialize()

rs.simulate(60, True) # days

# Export results as segments

rb.SegmentAnalyser(rs).write("../results/example_3e.vtp")

# Export container geometry as Paraview Python script

rs.write("../results/example_3e.py")

print("done.")

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