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feat: Add per-base coverage breakdown to Coverage struct and plot by fxwiegand · Pull Request #368 · alignoth/alignoth · GitHub

feat: Add per-base coverage breakdown to Coverage struct and plot - #368

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fxwiegand merged 1 commit into
mainfrom
bases-in-coverage
Oct 14, 2025
Merged

fxwiegand merged 1 commit into
mainfrom
bases-in-coverage

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fxwiegand commented Oct 14, 2025
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This PR adds pre-base information to the coverage part of the plot. This results in much faster recognition of high frequency variants even if the plot is very tall and the substitution appear in reads that are not within the current viewing frame (or arent part of the subsampled set).

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 50.47%. Comparing base (d82f529) to head (1308891).
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Additional details and impacted files
@@            Coverage Diff             @@
##             main     #368      +/-   ##
==========================================
+ Coverage   48.62%   50.47%   +1.85%     
==========================================
  Files           5        5              
  Lines         508      527      +19     
==========================================
+ Hits          247      266      +19     
  Misses        261      261              

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fxwiegand merged commit 5373868 into main Oct 14, 2025
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fxwiegand deleted the bases-in-coverage branch October 14, 2025 12:48
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