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TST: 3.1RC testing segfault · Issue #8148 · astropy/astropy · GitHub

TST: 3.1RC testing segfault #8148

Description

I tried multiple times but every time, it terminates silently like this:

prompt> python setup.py test --remote-data -V
...
platform linux -- Python 3.7.0, pytest-3.8.2, py-1.7.0, pluggy-0.8.0

Running tests with Astropy version 3.1rc1.
Running tests in astropy docs.

Date: 2018-11-16T16:21:31

Platform: Linux-3.10.0-862.14.4.el7.x86_64-x86_64-with-redhat-7.5-Maipo

Executable: .../envs/astrodev/bin/python

Full Python Version: 
3.7.0 | packaged by conda-forge | (default, Sep 30 2018, 14:56:18) 
[GCC 4.8.2 20140120 (Red Hat 4.8.2-15)]

encodings: sys: utf-8, locale: UTF-8, filesystem: utf-8
byteorder: little
float info: dig: 15, mant_dig: 15

Numpy: 1.15.2
Scipy: 1.1.0
Matplotlib: 3.0.0
h5py: 2.8.0
Pandas: 0.23.4
Cython: 0.29
astropy_helpers: 3.1rc1
Using Astropy options: remote_data: any.

Matplotlib: 3.0.0
Freetype: 2.9.1
rootdir: /tmp/astropy-test-1919ybry/lib/python3.7/site-packages, inifile: setup.cfg
plugins: xdist-1.24.0, remotedata-0.3.1, openfiles-0.3.0, mpl-0.10, forked-0.2, doctestplus-0.1.3, arraydiff-0.2
...
astropy/tests/test_logger.py::test_exception_logging_enable_twice PASSED [ 72%]
astropy/tests/test_logger.py::test_exception_logging_overridden PASSED   [ 72%]
astropy/tests/test_logger.py::test_exception_logging PASSED              [ 72%]
astropy/tests/test_logger.py::test_exception_logging_origin PASSED       [ 72%]
astropy/tests/test_logger.py::test_exception_logging_argless_exception
prompt>
# packages in environment at .../anaconda/envs/astrodev:
#
# Name                    Version                   Build  Channel
alabaster                 0.7.12                     py_0    conda-forge
apipkg                    1.5                        py_0    conda-forge
asn1crypto                0.24.0                py37_1003    conda-forge
astropy                   3.1rc1                    <pip>
astropy-sphinx-theme      1.0                        py_0    astropy
atomicwrites              1.2.1                      py_0    conda-forge
attrs                     18.2.0                     py_0    conda-forge
babel                     2.6.0                      py_1    conda-forge
Babel                     2.6.0                     <pip>
backcall                  0.1.0                      py_0    conda-forge
beautifulsoup4            4.6.3                 py37_1000    conda-forge
blas                      1.0                         mkl  
bleach                    3.0.2                      py_0    conda-forge
bzip2                     1.0.6                h470a237_2    conda-forge
ca-certificates           2018.10.15           ha4d7672_0    conda-forge
cairo                     1.14.12              h276e583_5    conda-forge
certifi                   2018.10.15            py37_1000    conda-forge
cffi                      1.11.5           py37h5e8e0c9_1    conda-forge
chardet                   3.0.4                 py37_1003    conda-forge
chardet                   3.0.4                     <pip>
cloudpickle               0.6.1                      py_0    conda-forge
coverage                  4.5.1            py37h470a237_1    conda-forge
cryptography              2.3.1            py37hdffb7b8_0    conda-forge
cycler                    0.10.0                     py_1    conda-forge
cython                    0.29             py37hfc679d8_0    conda-forge
dask-core                 0.20.0                     py_0    conda-forge
dbus                      1.13.0               h3a4f0e9_0    conda-forge
decorator                 4.3.0                      py_0    conda-forge
docutils                  0.14                      <pip>
docutils                  0.14                  py37_1001    conda-forge
execnet                   1.5.0                      py_0    conda-forge
expat                     2.2.5                hfc679d8_2    conda-forge
fontconfig                2.13.1               h65d0f4c_0    conda-forge
freetype                  2.9.1                h6debe1e_4    conda-forge
gettext                   0.19.8.1             h5e8e0c9_1    conda-forge
glib                      2.56.2               h464dc38_0    conda-forge
graphite2                 1.3.12               hfc679d8_1    conda-forge
graphviz                  2.38.0               h08bfae6_9    conda-forge
gst-plugins-base          1.12.5               hde13a9d_0    conda-forge
gstreamer                 1.12.5               h5856ed1_0    conda-forge
h5py                      2.8.0            py37h097b052_4    conda-forge
harfbuzz                  1.9.0                h04dbb29_1    conda-forge
hdf5                      1.10.3               hc401514_2    conda-forge
html5lib                  1.0.1                      py_0    conda-forge
icu                       58.2                 hfc679d8_0    conda-forge
idna                      2.7                       <pip>
idna                      2.7                   py37_1002    conda-forge
imageio                   2.3.0                      py_1    conda-forge
imagesize                 1.1.0                     <pip>
imagesize                 1.1.0                      py_0    conda-forge
intel-openmp              2019.0                      118  
ipython                   7.1.1           py37h24bf2e0_1000    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
jedi                      0.13.1                py37_1000    conda-forge
jinja2                    2.10                       py_1    conda-forge
jpeg                      9c                   h470a237_1    conda-forge
jplephem                  2.8                pyh11f86e8_0    conda-forge
kiwisolver                1.0.1            py37h2d50403_2    conda-forge
libffi                    3.2.1                hfc679d8_5    conda-forge
libgcc-ng                 8.2.0                hdf63c60_1  
libgfortran               3.0.0                         1    conda-forge
libgfortran-ng            7.2.0                hdf63c60_3    conda-forge
libiconv                  1.15                 h470a237_3    conda-forge
libpng                    1.6.35               ha92aebf_2    conda-forge
libstdcxx-ng              7.2.0                hdf63c60_3    conda-forge
libtiff                   4.0.9                he6b73bb_2    conda-forge
libtool                   2.4.6                h470a237_2    conda-forge
libuuid                   2.32.1               h470a237_2    conda-forge
libxcb                    1.13                 h470a237_2    conda-forge
libxml2                   2.9.8                h422b904_5    conda-forge
libxslt                   1.1.32               h88dbc4e_2    conda-forge
lxml                      4.2.5            py37hc9114bc_0    conda-forge
markupsafe                1.0              py37h470a237_1    conda-forge
matplotlib                3.0.0            py37h0b34cb6_1    conda-forge
mkl                       2019.0                      118  
mkl_fft                   1.0.4            py37h4414c95_1  
mkl_random                1.0.1            py37h4414c95_1  
more-itertools            4.3.0                 py37_1000    conda-forge
mpmath                    1.0.0                      py_1    conda-forge
ncurses                   6.1                  hfc679d8_1    conda-forge
networkx                  2.2                        py_1    conda-forge
nose                      1.3.7                 py37_1002    conda-forge
numpy                     1.15.2           py37h1d66e8a_1  
numpy-base                1.15.2           py37h81de0dd_1  
numpydoc                  0.8.0                      py_1    conda-forge
olefile                   0.46                       py_0    conda-forge
openblas                  0.3.3                ha44fe06_1    conda-forge
openssl                   1.0.2p               h470a237_1    conda-forge
packaging                 18.0                       py_0    conda-forge
pandas                    0.23.4           py37hf8a1672_0    conda-forge
pango                     1.40.14              he752989_2    conda-forge
parso                     0.3.1                      py_0    conda-forge
pcre                      8.41                 hfc679d8_3    conda-forge
pexpect                   4.6.0                 py37_1000    conda-forge
pickleshare               0.7.5                 py37_1000    conda-forge
pillow                    5.3.0            py37hc736899_0    conda-forge
pip                       18.1                  py37_1000    conda-forge
pixman                    0.34.0               h470a237_3    conda-forge
pluggy                    0.8.0                      py_0    conda-forge
prompt_toolkit            2.0.6                      py_0    conda-forge
psutil                    5.4.7            py37h470a237_1    conda-forge
pthread-stubs             0.4                  h470a237_1    conda-forge
ptyprocess                0.6.0                 py37_1000    conda-forge
py                        1.7.0                      py_0    conda-forge
pycparser                 2.19                       py_0    conda-forge
pygments                  2.2.0                      py_1    conda-forge
pyopenssl                 18.0.0                py37_1000    conda-forge
pyparsing                 2.2.2                      py_0    conda-forge
pyqt                      5.6.0            py37h8210e8a_7    conda-forge
pysocks                   1.6.8                 py37_1002    conda-forge
pytest                    3.8.2                 py37_1000    conda-forge
pytest-arraydiff          0.2                        py_0    conda-forge
pytest-astropy            0.4.0                      py_0    astropy
pytest-doctestplus        0.1.3                      py_0    astropy
pytest-forked             0.2                        py_0    conda-forge
pytest-mpl                0.10                       py_0    astropy
pytest-openfiles          0.3.0                      py_0    astropy
pytest-remotedata         0.3.1                      py_0    astropy
pytest-xdist              1.24.0                     py_0    conda-forge
python                    3.7.0                h5001a0f_4    conda-forge
python-dateutil           2.7.5                      py_0    conda-forge
pytz                      2018.7                     py_0    conda-forge
pywavelets                1.0.1            py37h7eb728f_0    conda-forge
pyyaml                    3.13             py37h470a237_1    conda-forge
qt                        5.6.2                hf70d934_9    conda-forge
readline                  7.0                  haf1bffa_1    conda-forge
requests                  2.20.0                py37_1000    conda-forge
scikit-image              0.14.1           py37hfc679d8_0    conda-forge
scipy                     1.1.0            py37hc49cb51_0  
setuptools                40.5.0                   py37_0    conda-forge
sip                       4.18.1           py37hfc679d8_0    conda-forge
six                       1.11.0                py37_1001    conda-forge
skyfield                  1.9                        py_0    conda-forge
snowballstemmer           1.2.1                      py_1    conda-forge
snowballstemmer           1.2.1                     <pip>
sortedcontainers          2.0.5                      py_0    conda-forge
Sphinx                    1.6.7                     <pip>
sphinx-astropy            1.0                        py_1    astropy
sphinx-automodapi         0.8                        py_0    astropy
sphinx-gallery            0.2.0                 py37_1000    conda-forge
sphinxcontrib-websupport  1.1.0                      py_1    conda-forge
sqlite                    3.25.2               hb1c47c0_0    conda-forge
tk                        8.6.8                ha92aebf_0    conda-forge
toolz                     0.9.0                      py_1    conda-forge
tornado                   5.1.1            py37h470a237_0    conda-forge
traitlets                 4.3.2                 py37_1000    conda-forge
urllib3                   1.23                  py37_1001    conda-forge
urllib3                   1.24                      <pip>
wcwidth                   0.1.7                      py_1    conda-forge
webencodings              0.5.1                      py_1    conda-forge
wheel                     0.32.2                   py37_0    conda-forge
xorg-kbproto              1.0.7                h470a237_2    conda-forge
xorg-libice               1.0.9                h470a237_4    conda-forge
xorg-libsm                1.2.3                h8c8a85c_0    conda-forge
xorg-libx11               1.6.6                h470a237_0    conda-forge
xorg-libxau               1.0.8                h470a237_6    conda-forge
xorg-libxdmcp             1.1.2                h470a237_7    conda-forge
xorg-libxext              1.3.3                h470a237_4    conda-forge
xorg-libxpm               3.5.12               h470a237_2    conda-forge
xorg-libxrender           0.9.10               h470a237_2    conda-forge
xorg-libxt                1.1.5                h470a237_2    conda-forge
xorg-renderproto          0.11.1               h470a237_2    conda-forge
xorg-xextproto            7.3.0                h470a237_2    conda-forge
xorg-xproto               7.0.31               h470a237_7    conda-forge
xz                        5.2.4                h470a237_1    conda-forge
yaml                      0.1.7                h470a237_1    conda-forge
zlib                      1.2.11               h470a237_3    conda-forge

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