throw exception if residue type cannot be resolved · biojava/biojava@222a8ae · GitHub

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Commit 222a8ae

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valasatava

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throw exception if residue type cannot be resolved

1 parent 4d1b305 commit 222a8ae
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+3Lines changed: 3 additions & 0 deletions

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• biojava-structure/src/main/java/org/biojava/nbio/structure/io/mmtf
  • MmtfStructureReader.java

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‎biojava-structure/src/main/java/org/biojava/nbio/structure/io/mmtf/MmtfStructureReader.java‎

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+3Lines changed: 3 additions & 0 deletions

Original file line number	Diff line number	Diff line change
@@ -214,6 +214,9 @@ public void setGroupInfo(String groupName, int groupNumber,
214	214	char singleLetterCode, int sequenceIndexId, int secStructType) {
215	215	// Get the polymer type
216	216	ResidueType residueType = ResidueType.getResidueTypeFromString(chemCompType);
	217	+ if (residueType == null)
	218	+ throw new IllegalStateException("Couldn't resolve residue type for "+ chemCompType);
	219	+
217	220	int polymerType = getGroupTypIndicator(residueType.polymerType);
218	221	switch (polymerType) {
219	222	case 1:

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