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| 1 | - BioJava tutorial | ||
| 2 | - ================= | ||
| 1 | + BioJava Tutorial | ||
| 2 | + ==================== | ||
| 3 | 3 | ||
| 4 | 4 | A brief introduction into [BioJava](https://github.com/biojava/biojava). | |
| 5 | - == | ||
| 5 | + ----- | ||
| 6 | 6 | ||
| 7 | 7 | The goal of this tutorial is to provide an educational introduction into some of the features that are provided by BioJava. | |
| 8 | 8 | ||
@@ -14,11 +14,11 @@ The tutorial is intended to work with the most recent version of BioJava, althou | |||
| 14 | 14 | ||
| 15 | 15 | Quick [Installation](installation.md) | |
| 16 | 16 | ||
| 17 | - Book 1: [The Core module](core/README.md), basic working with sequences. | ||
| 17 | + Book 1: [The Core Module](core/README.md), basic working with sequences. | ||
| 18 | 18 | ||
| 19 | - Book 2: [The Alignment module](alignment/README.md), pairwise and multiple alignments of protein sequences. | ||
| 19 | + Book 2: [The Alignment Module](alignment/README.md), pairwise and multiple alignments of protein sequences. | ||
| 20 | 20 | ||
| 21 | - Book 3: [The Structure modules](structure/README.md), everything related to working with 3D structures. | ||
| 21 | + Book 3: [The Structure Modules](structure/README.md), everything related to working with 3D structures. | ||
| 22 | 22 | ||
| 23 | 23 | Book 4: [The Genomics Module](genomics/README.md), working with genomic data. | |
| 24 | 24 | ||
@@ -28,7 +28,7 @@ The content of this tutorial is available under the [CC-BY](http://creativecommo | |||
| 28 | 28 | ||
| 29 | 29 | [view license](license.md) | |
| 30 | 30 | ||
| 31 | - ## Please cite | ||
| 31 | + ## Please Cite | ||
| 32 | 32 | ||
| 33 | 33 | **BioJava: an open-source framework for bioinformatics in 2012**<br/> | |
| 34 | 34 | *Andreas Prlic; Andrew Yates; Spencer E. Bliven; Peter W. Rose; Julius Jacobsen; Peter V. Troshin; Mark Chapman; Jianjiong Gao; Chuan Hock Koh; Sylvain Foisy; Richard Holland; Gediminas Rimsa; Michael L. Heuer; H. Brandstatter-Muller; Philip E. Bourne; Scooter Willis* <br/> | |
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