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/* GNUPLOT - datafile.c */
/*[
* Copyright 1986 - 1993, 1998, 2004 Thomas Williams, Colin Kelley
*
* Permission to use, copy, and distribute this software and its
* documentation for any purpose with or without fee is hereby granted,
* provided that the above copyright notice appear in all copies and
* that both that copyright notice and this permission notice appear
* in supporting documentation.
*
* Permission to modify the software is granted, but not the right to
* distribute the complete modified source code. Modifications are to
* be distributed as patches to the released version. Permission to
* distribute binaries produced by compiling modified sources is granted,
* provided you
* 1. distribute the corresponding source modifications from the
* released version in the form of a patch file along with the binaries,
* 2. add special version identification to distinguish your version
* in addition to the base release version number,
* 3. provide your name and address as the primary contact for the
* support of your modified version, and
* 4. retain our contact information in regard to use of the base
* software.
* Permission to distribute the released version of the source code along
* with corresponding source modifications in the form of a patch file is
* granted with same provisions 2 through 4 for binary distributions.
*
* This software is provided "as is" without express or implied warranty
* to the extent permitted by applicable law.
]*/
/* AUTHOR : David Denholm */
/*
* this file provides the functions to handle data-file reading..
* takes care of all the pipe / stdin / index / using worries
*/
/*{{{ notes */
/*
* every a:b:c:d:e:f - plot every a'th point from c to e,
* in every b lines from d to f
* ie for (line=d; line<=f; line+=b)
* for (point=c; point >=e; point+=a)
*
* public variables declared in this file.
* int df_no_use_specs - number of columns specified with 'using'
* int df_no_tic_specs - count of additional ticlabel columns
* int df_line_number - for error reporting
* int df_datum - increases with each data point
* int df_eof - end of file
*
* functions
* int df_open(char *file_name, int max_using, plot_header *plot)
* parses index / using on command line
* max_using is max no of 'using' columns allowed (obsolete?)
* plot_header is NULL if called from fit or set_palette code
* returns number of 'using' cols specified, or -1 on error (?)
*
* int df_readline(double vector[], int max)
* reads a line, does all the 'index' and 'using' manipulation
* deposits values into vector[]
* returns
* number of columns parsed [0 = not a blank line, but no valid data],
* DF_EOF - end of file
* DF_UNDEFINED - undefined result during eval of extended using spec
* DF_MISSING - requested column matched that of 'set missing <foo>'
* DF_FIRST_BLANK - first consecutive blank line
* DF_SECOND_BLANK - second consecutive blank line
* DF_FOUND_KEY_TITLE - only relevant to first line of data
* DF_KEY_TITLE_MISSING and only for 'set key autotitle columnhead'
* DF_STRINGDATA - not currently used by anyone
* DF_COLUMN_HEADERS - first row used as headers rather than data
*
* if a using spec was given, lines not fulfilling spec are ignored.
* we will always return exactly the number of items specified
*
* if no spec given, we return number of consecutive columns we parsed.
*
* if we are processing indexes, separated by 'n' blank lines,
* we will return n-1 blank lines before noticing the index change
*
* void df_close()
* closes a currently open file.
*
* void f_dollars(x)
* void f_column() actions for expressions using $i, column(j), etc
* void f_valid()
*
*
* Line parsing is slightly differently from previous versions of gnuplot...
* given a line containing fewer columns than asked for, gnuplot used to make
* up values... Now if I have explicitly said 'using 1:2:3', then if
* column 3 doesn't exist, I dont want this point...
*
*/
/*}}} */
/* Daniel Sebald: added general binary 2d data support. (20 August 2004)
*/
#include
"datafile.h"
#include
"datablock.h"
#include
"alloc.h"
#include
"axis.h"
#include
"command.h"
#include
"eval.h"
#include
"gp_time.h"
#include
"graphics.h"
#include
"misc.h"
#include
"parse.h"
#include
"plot.h"
#include
"plot2d.h"
/* For reevaluate_plot_title() */
#include
"readline.h"
#include
"util.h"
#include
"breaders.h"
#include
"tabulate.h"
/* For sanity check inblock != outblock */
#include
"variable.h"
/* For locale handling */
/* test to see if the end of an inline datafile is reached */
#define
is_EOF
(
c
) ((c) == 'e' || (c) == 'E')
/* is it a comment line? */
#define
is_comment
(
c
) ((c) && (strchr(df_commentschars, (c)) != NULL))
/* Used to skip whitespace but not cross a field boundary */
#define
NOTSEP
(!df_separators || !strchr(df_separators,*s))
/*{{{ static fns */
static
int
check_missing
(
char
*
s
);
static
void
expand_df_column
(
int
);
static
void
clear_df_column_headers
(
void
);
static
char
*
df_gets
(
void
);
static
int
df_tokenise
(
char
*
s
);
static
float
*
df_read_matrix
(
int
*
rows
,
int
*
columns
);
static
void
plot_option_every
(
void
);
static
void
plot_option_index
(
void
);
static
void
plot_option_using
(
int
);
static
TBOOLEAN
valid_format
(
const
char
*
);
static
void
plot_ticlabel_using
(
int
);
static
void
add_key_entry
(
char
*
temp_string
,
int
df_datum
);
static
char
*
df_generate_pseudodata
(
void
);
static
char
*
df_generate_ascii_array_entry
(
void
);
static
int
df_skip_bytes
(
off_t
nbytes
);
/*}}} */
/*{{{ variables */
enum
COLUMN_TYPE
{
CT_DEFAULT
,
CT_STRING
,
CT_KEYLABEL
,
CT_XTICLABEL
,
CT_X2TICLABEL
,
CT_YTICLABEL
,
CT_Y2TICLABEL
,
CT_ZTICLABEL
,
CT_CBTICLABEL
};
/* public (exported) variables client might access */
int
df_no_use_specs
;
/* how many using columns were specified */
int
df_line_number
;
int
df_datum
;
/* suggested x value if none given */
int
df_last_col
=
0
;
/* visible to user via STATS_columns */
int
df_bad_matrix_values
;
AXIS_INDEX
df_axis
[
MAXDATACOLS
];
TBOOLEAN
df_matrix
=
FALSE;
/* indicates if data originated from a 2D or 3D format */
void
*
df_pixeldata
;
/* pixel data from an external library (e.g. libgd) */
/* string representing missing values in ascii datafiles */
char
*
missing_val
=
NULL
;
/* input field separators, NULL if whitespace is the separator */
char
*
df_separators
=
NULL
;
/* comments chars */
char
*
df_commentschars
=
0
;
/* If any 'inline data' are in use for the current plot, flag this */
TBOOLEAN
plotted_data_from_stdin
=
FALSE;
/* This flag is controlled by 'set/unset datafile columnheaders'.
* Even if it is FALSE, columnheader processing may still be triggered
* implicitly by use of the columheader function or keyword
* in a using spec or title.
*/
TBOOLEAN
df_columnheaders
=
FALSE;
/* Setting this allows the parser to recognize Fortran D or Q */
/* format constants in the input file. But it slows things down */
TBOOLEAN
df_fortran_constants
=
FALSE;
/* Setting this disables re-initialization of the floating point exception */
/* handler before every expression evaluation in a using spec. */
TBOOLEAN
df_nofpe_trap
=
FALSE;
/* private variables */
/* Bookkeeping for df_fgets() and df_gets().
* Must be initialized before any calls to either function.
*/
static
char
*
df_line
=
NULL
;
static
size_t
max_line_len
=
0
;
#define
DATA_LINE_BUFSIZ
160
static
FILE
*
data_fp
=
NULL
;
#if
defined(
PIPES
)
static
TBOOLEAN
df_pipe_open
=
FALSE;
#endif
#if
defined(
HAVE_FDOPEN
)
static
int
data_fd
=
-2
;
/* only used for file redirection */
#endif
static
TBOOLEAN
mixed_data_fp
=
FALSE;
/* inline data */
char
*
df_filename
=
NULL
;
/* name of data file */
static
int
df_eof
=
0
;
static
int
df_no_tic_specs
;
/* ticlabel columns not counted in df_no_use_specs */
#ifndef
MAXINT
/* should there be one already defined ? */
# define
MAXINT
INT_MAX
/* from <limits.h> */
#endif
/* stuff for implementing index */
static
int
blank_count
=
0
;
/* how many blank lines recently */
static
int
df_lower_index
=
0
;
/* first mesh required */
static
int
df_upper_index
=
MAXINT
;
static
int
df_index_step
=
1
;
/* 'every' for indices */
static
int
df_current_index
;
/* current mesh */
static
int
df_last_index_read
;
/* last mesh we actually read data from */
/* stuff for named index support */
static
char
*
indexname
=
NULL
;
static
TBOOLEAN
index_found
=
FALSE;
static
int
df_longest_columnhead
=
0
;
/* stuff for every point:line */
static
TBOOLEAN
set_every
=
FALSE;
static
int
everypoint
=
1
;
static
int
firstpoint
=
0
;
static
int
lastpoint
=
MAXINT
;
static
int
everyline
=
1
;
static
int
firstline
=
0
;
static
int
lastline
=
MAXINT
;
static
int
point_count
=
-1
;
/* point counter - preincrement and test 0 */
static
int
line_count
=
0
;
/* line counter */
/* for ascii file "skip" lines at head of file */
static
int
df_skip_at_front
=
0
;
/* for pseudo-data (1 if filename = '+'; 2 if filename = '++') */
static
int
df_pseudodata
=
0
;
static
int
df_pseudorecord
=
0
;
static
int
df_pseudospan
=
0
;
static
double
df_pseudovalue_0
=
0
;
static
double
df_pseudovalue_1
=
0
;
/* for datablocks */
static
TBOOLEAN
df_datablock
=
FALSE;
static
char
*
*
df_datablock_line
=
NULL
;
/* for arrays */
static
int
df_array_index
=
0
;
static
char
*
df_arrayname
=
NULL
;
/* track dimensions of input matrix/array/image */
static
unsigned
int
df_xpixels
;
static
unsigned
int
df_ypixels
;
static
TBOOLEAN
df_transpose
;
/* parsing stuff */
struct
use_spec_s
use_spec
[
MAXDATACOLS
];
static
char
*
df_format
=
NULL
;
static
char
*
df_binary_format
=
NULL
;
TBOOLEAN
evaluate_inside_using
=
FALSE;
TBOOLEAN
df_warn_on_missing_columnheader
=
FALSE;
/* rather than three arrays which all grow dynamically, make one
* dynamic array of this structure
*/
typedef
struct
df_column_struct
{
double
datum
;
enum
DF_STATUS
good
;
char
*
position
;
/* points to start of this field in current line */
char
*
header
;
/* points to copy of the header for this column */
}
df_column_struct
;
static
df_column_struct
*
df_column
=
NULL
;
/* we'll allocate space as needed */
static
int
df_max_cols
=
0
;
/* space allocated */
static
int
df_no_cols
;
/* total number of columns found in input lines */
static
int
fast_columns
;
/* corey@cac optimization */
char
*
df_tokens
[
MAXDATACOLS
];
/* filled in by df_tokenise */
static
char
*
df_stringexpression
[
MAXDATACOLS
];
/* filled in after evaluate_at() */
static
struct
curve_points
*
df_current_plot
;
/* used to process histogram labels + key entries */
struct
value
df_strings
[
MAXDATACOLS
];
/* used only by TABLESTYLE */
static
TBOOLEAN
df_tabulate_strings
=
FALSE;
/* used only by TABLESTYLE */
/* These control the handling of fields in the first row of a data file.
* See also parse_1st_row_as_headers.
*/
#define
NO_COLUMN_HEADER
(-99)
/* some value that can never be a real column */
static
int
column_for_key_title
=
NO_COLUMN_HEADER
;
static
TBOOLEAN
df_already_got_headers
=
FALSE;
char
*
df_key_title
=
NULL
;
/* filled in from column header if requested */
struct
at_type
*
df_plot_title_at
;
/* used for deferred evaluation of plot title */
/* Binary *read* variables used by df_readbinary().
* There is a confusing difference between the ascii and binary "matrix" keywords.
* Ascii matrix data by default is interpreted as having an implicit uniform grid
* of x and y coords that are not actually present in the data file.
* The equivalent binary data format is called "binary general".
* In both of these cases the internal flag df_nonuniform_matrix is FALSE;
* Binary matrix data contains explicit y values in the first row, and explicit x
* values in the first column. This is signalled by "binary matrix".
* In this case the internal flag df_nonuniform_matrix is TRUE.
*
* EAM May 2011 - Add a keyword "nonuniform matrix" to indicate ascii matrix data
* in the same format as "binary matrix", i.e. with explicit x and y coordinates.
* EAM Jul 2014 - Add keywords "columnheaders" and "rowheaders" to indicate ascii
* matrix data in the uniform grid format containing labels in row 1 and column 1.
*/
static
TBOOLEAN
df_read_binary
;
static
TBOOLEAN
df_nonuniform_matrix
;
static
TBOOLEAN
df_matrix_columnheaders
,
df_matrix_rowheaders
;
static
int
df_plot_mode
;
static
int
df_readascii
(
double
[],
int
);
static
int
df_readbinary
(
double
[],
int
);
static
void
initialize_use_spec
(
void
);
static
void
initialize_plot_style
(
struct
curve_points
*
);
static
void
initialize_binary_vars
(
void
);
static
void
df_insert_scanned_use_spec
(
int
);
static
void
adjust_binary_use_spec
(
struct
curve_points
*
);
static
void
clear_binary_records
(
df_records_type
);
static
void
plot_option_binary_format
(
char
*
);
static
void
plot_option_binary
(
TBOOLEAN
,
TBOOLEAN
);
static
void
plot_option_array
(
void
);
static
TBOOLEAN
rotation_matrix_2D
(
double
R
[][
2
],
double
);
static
TBOOLEAN
rotation_matrix_3D
(
double
P
[][
3
],
double
*
);
static
int
token2tuple
(
double
*
,
int
);
static
void
df_determine_matrix_info
(
FILE
*
);
static
void
df_swap_bytes_by_endianess
(
char
*
,
int
,
int
);
typedef
enum
df_multivalue_type
{
DF_DELTA
,
DF_FLIP_AXIS
,
DF_FLIP
,
DF_SCAN
,
DF_ORIGIN
,
DF_CENTER
,
DF_ROTATION
,
DF_PERPENDICULAR
,
DF_SKIP
}
df_multivalue_type
;
static
void
plot_option_multivalued
(
df_multivalue_type
,
int
);
char
*
df_endian
[
DF_ENDIAN_TYPE_LENGTH
]
=
{
"little"
,
"pdp (middle)"
,
"swapped pdp (dimmle)"
,
"big"
};
#define
SUPPORT_MIDDLE_ENDIAN
1
#if
SUPPORT_MIDDLE_ENDIAN
/* To generate a swap, take the bit-wise complement of the lowest two bits. */
typedef
enum
df_byte_read_order_type
{
DF_0123
,
DF_1032
,
DF_2301
,
DF_3210
}
df_byte_read_order_type
;
/* First argument, this program's endianess. Second argument, file's endianess.
* Don't use directly. Use 'byte_read_order()' function instead.*/
static
char
df_byte_read_order_map
[
4
][
4
]
=
{
{
DF_0123
,
DF_1032
,
DF_2301
,
DF_3210
},
{
DF_1032
,
DF_0123
,
DF_1032
,
DF_2301
},
{
DF_2301
,
DF_1032
,
DF_0123
,
DF_1032
},
{
DF_3210
,
DF_2301
,
DF_1032
,
DF_0123
}
};
static
long
long_0x2468
=
0x2468
;
#define
TEST_BIG_PDP
( (((char *)&long_0x2468)[0] < 3) ? DF_BIG_ENDIAN : DF_PDP_ENDIAN )
#define
THIS_COMPILER_ENDIAN
( (((char *)&long_0x2468)[0] < 5) ? TEST_BIG_PDP : DF_LITTLE_ENDIAN )
/* Argument is file's endianess type. */
static
df_byte_read_order_type
byte_read_order
(
df_endianess_type
);
/* Logical variables indicating information about data file. */
TBOOLEAN
df_binary_file
;
TBOOLEAN
df_matrix_file
;
static
int
df_M_count
;
static
int
df_N_count
;
static
int
df_O_count
;
/* Initially set to default and then possibly altered by command line. */
df_binary_file_record_struct
*
df_bin_record
=
0
;
/* Default settings. */
df_binary_file_record_struct
*
df_bin_record_default
=
0
;
/* Settings that are transferred to default upon reset. */
df_binary_file_record_struct
df_bin_record_reset
=
{
{
-1
,
0
,
0
},
{
1
,
1
,
1
},
{
1
,
1
,
1
},
DF_TRANSLATE_DEFAULT
,
{
0
,
0
,
0
},
0
,
{
0
,
0
,
1
},
{
DF_SCAN_POINT
,
DF_SCAN_LINE
,
DF_SCAN_PLANE
},
FALSE,
{
0
,
0
,
0
},
{
0
,
0
,
0
},
{
1
,
1
,
1
},
{
0
,
0
,
0
},
DF_TRANSLATE_DEFAULT
,
{
0
,
0
,
0
},
0
,
0
,
/* submatrix size */
NULL
/* data_memory */
};
int
df_max_num_bin_records
=
0
,
df_num_bin_records
,
df_bin_record_count
;
int
df_max_num_bin_records_default
=
0
,
df_num_bin_records_default
;
/* Used to mark the location of a blank line in the original data input file */
struct
coordinate
blank_data_line
=
{
UNDEFINED
,
-999
,
-999
,
-999
,
-999
,
-999
,
-999
,
-999
};
static
void
gpbin_filetype_function
(
void
);
static
void
raw_filetype_function
(
void
);
static
void
avs_filetype_function
(
void
);
static
void
(
*
binary_input_function
)(
void
);
/* Will point to one of the above */
static
void
auto_filetype_function
(
void
){}
/* Just a placeholder for auto */
struct
gen_ftable
df_bin_filetype_table
[]
=
{
{
"avs"
,
avs_filetype_function
},
{
"bin"
,
raw_filetype_function
},
{
"edf"
,
edf_filetype_function
},
{
"ehf"
,
edf_filetype_function
},
{
"gif"
,
gif_filetype_function
},
{
"gpbin"
,
gpbin_filetype_function
},
{
"jpeg"
,
jpeg_filetype_function
},
{
"jpg"
,
jpeg_filetype_function
},
{
"png"
,
png_filetype_function
},
{
"raw"
,
raw_filetype_function
},
{
"rgb"
,
raw_filetype_function
},
{
"auto"
,
auto_filetype_function
},
{
NULL
,
NULL
}
};
#define
RAW_FILETYPE
1
/* Initially set to default and then possibly altered by command line. */
static
int
df_bin_filetype
;
/* Default setting. */
static
int
df_bin_filetype_default
;
static
df_endianess_type
df_bin_file_endianess_default
;
/* Setting that is transferred to default upon reset. */
static
int
df_bin_filetype_reset
=
-1
;
#define
DF_BIN_FILE_ENDIANESS_RESET
THIS_COMPILER_ENDIAN
/* This one is needed by breaders.c */
df_endianess_type
df_bin_file_endianess
;
typedef
struct
df_bin_scan_table_2D_struct
{
char
*
string
;
df_sample_scan_type
scan
[
3
];
}
df_bin_scan_table_2D_struct
;
df_bin_scan_table_2D_struct
df_bin_scan_table_2D
[]
=
{
{
"xy"
, {
DF_SCAN_POINT
,
DF_SCAN_LINE
,
DF_SCAN_PLANE
}},
{
"yx"
, {
DF_SCAN_LINE
,
DF_SCAN_POINT
,
DF_SCAN_PLANE
}},
{
"tr"
, {
DF_SCAN_POINT
,
DF_SCAN_LINE
,
DF_SCAN_PLANE
}},
{
"rt"
, {
DF_SCAN_LINE
,
DF_SCAN_POINT
,
DF_SCAN_PLANE
}}
};
#define
TRANSPOSE_INDEX
1
typedef
struct
df_bin_scan_table_3D_struct
{
char
*
string
;
df_sample_scan_type
scan
[
3
];
}
df_bin_scan_table_3D_struct
;
df_bin_scan_table_3D_struct
df_bin_scan_table_3D
[]
=
{
{
"xyz"
, {
DF_SCAN_POINT
,
DF_SCAN_LINE
,
DF_SCAN_PLANE
}},
{
"zxy"
, {
DF_SCAN_LINE
,
DF_SCAN_PLANE
,
DF_SCAN_POINT
}},
{
"yzx"
, {
DF_SCAN_PLANE
,
DF_SCAN_POINT
,
DF_SCAN_LINE
}},
{
"yxz"
, {
DF_SCAN_LINE
,
DF_SCAN_POINT
,
DF_SCAN_PLANE
}},
{
"xzy"
, {
DF_SCAN_POINT
,
DF_SCAN_PLANE
,
DF_SCAN_LINE
}},
{
"zyx"
, {
DF_SCAN_PLANE
,
DF_SCAN_LINE
,
DF_SCAN_POINT
}},
{
"trz"
, {
DF_SCAN_POINT
,
DF_SCAN_LINE
,
DF_SCAN_PLANE
}},
{
"ztr"
, {
DF_SCAN_LINE
,
DF_SCAN_PLANE
,
DF_SCAN_POINT
}},
{
"rzt"
, {
DF_SCAN_PLANE
,
DF_SCAN_POINT
,
DF_SCAN_LINE
}},
{
"rtz"
, {
DF_SCAN_LINE
,
DF_SCAN_POINT
,
DF_SCAN_PLANE
}},
{
"tzr"
, {
DF_SCAN_POINT
,
DF_SCAN_PLANE
,
DF_SCAN_LINE
}},
{
"zrt"
, {
DF_SCAN_PLANE
,
DF_SCAN_LINE
,
DF_SCAN_POINT
}}
};
/* Names for machine dependent field sizes. */
char
*
ch_names
[]
=
{
"char"
,
"schar"
,
"c"
};
char
*
uc_names
[]
=
{
"uchar"
};
char
*
sh_names
[]
=
{
"short"
};
char
*
us_names
[]
=
{
"ushort"
};
char
*
in_names
[]
=
{
"int"
,
"sint"
,
"i"
,
"d"
};
char
*
ui_names
[]
=
{
"uint"
,
"u"
};
char
*
lo_names
[]
=
{
"long"
,
"ld"
};
char
*
ul_names
[]
=
{
"ulong"
,
"lu"
};
char
*
fl_names
[]
=
{
"float"
,
"f"
};
char
*
db_names
[]
=
{
"double"
,
"lf"
};
/* Machine independent names. */
char
*
byte_names
[]
=
{
"int8"
,
"byte"
};
char
*
ubyte_names
[]
=
{
"uint8"
,
"ubyte"
};
char
*
word_names
[]
=
{
"int16"
,
"word"
};
char
*
uword_names
[]
=
{
"uint16"
,
"uword"
};
char
*
word2_names
[]
=
{
"int32"
};
char
*
uword2_names
[]
=
{
"uint32"
};
char
*
word4_names
[]
=
{
"int64"
};
char
*
uword4_names
[]
=
{
"uint64"
};
char
*
float_names
[]
=
{
"float32"
};
char
*
float2_names
[]
=
{
"float64"
};
typedef
struct
df_binary_details_struct
{
char
*
*
name
;
unsigned short
no_names
;
df_binary_type_struct
type
;
}
df_binary_details_struct
;
typedef
struct
df_binary_tables_struct
{
df_binary_details_struct
*
group
;
unsigned short
group_length
;
}
df_binary_tables_struct
;
df_binary_details_struct
df_binary_details
[]
=
{
{
ch_names
,
sizeof
(
ch_names
)/
sizeof
(
ch_names
[
0
]),{
DF_CHAR
,
sizeof
(
char
)}},
{
uc_names
,
sizeof
(
uc_names
)/
sizeof
(
uc_names
[
0
]),{
DF_UCHAR
,
sizeof
(
unsigned
char
)}},
{
sh_names
,
sizeof
(
sh_names
)/
sizeof
(
sh_names
[
0
]),{
DF_SHORT
,
sizeof
(
short
)}},
{
us_names
,
sizeof
(
us_names
)/
sizeof
(
us_names
[
0
]),{
DF_USHORT
,
sizeof
(
unsigned short
)}},
{
in_names
,
sizeof
(
in_names
)/
sizeof
(
in_names
[
0
]),{
DF_INT
,
sizeof
(
int
)}},
{
ui_names
,
sizeof
(
ui_names
)/
sizeof
(
ui_names
[
0
]),{
DF_UINT
,
sizeof
(
unsigned
int
)}},
{
lo_names
,
sizeof
(
lo_names
)/
sizeof
(
lo_names
[
0
]),{
DF_LONG
,
sizeof
(
long
)}},
{
ul_names
,
sizeof
(
ul_names
)/
sizeof
(
ul_names
[
0
]),{
DF_ULONG
,
sizeof
(
unsigned long
)}},
{
fl_names
,
sizeof
(
fl_names
)/
sizeof
(
fl_names
[
0
]),{
DF_FLOAT
,
sizeof
(
float
)}},
{
db_names
,
sizeof
(
db_names
)/
sizeof
(
db_names
[
0
]),{
DF_DOUBLE
,
sizeof
(
double
)}},
{
NULL
,
0
, {
DF_LONGLONG
,
sizeof
(
long long
)}},
{
NULL
,
0
, {
DF_ULONGLONG
,
sizeof
(
unsigned long long
)}}
};
df_binary_details_struct
df_binary_details_independent
[]
=
{
{
byte_names
,
sizeof
(
byte_names
)/
sizeof
(
byte_names
[
0
]),{
SIGNED_TEST
(
1
),
1
}},
{
ubyte_names
,
sizeof
(
ubyte_names
)/
sizeof
(
ubyte_names
[
0
]),{
UNSIGNED_TEST
(
1
),
1
}},
{
word_names
,
sizeof
(
word_names
)/
sizeof
(
word_names
[
0
]),{
SIGNED_TEST
(
2
),
2
}},
{
uword_names
,
sizeof
(
uword_names
)/
sizeof
(
uword_names
[
0
]),{
UNSIGNED_TEST
(
2
),
2
}},
{
word2_names
,
sizeof
(
word2_names
)/
sizeof
(
word2_names
[
0
]),{
SIGNED_TEST
(
4
),
4
}},
{
uword2_names
,
sizeof
(
uword2_names
)/
sizeof
(
uword2_names
[
0
]),{
UNSIGNED_TEST
(
4
),
4
}},
{
word4_names
,
sizeof
(
word4_names
)/
sizeof
(
word4_names
[
0
]),{
SIGNED_TEST
(
8
),
8
}},
{
uword4_names
,
sizeof
(
uword4_names
)/
sizeof
(
uword4_names
[
0
]),{
UNSIGNED_TEST
(
8
),
8
}},
{
float_names
,
sizeof
(
float_names
)/
sizeof
(
float_names
[
0
]),{
FLOAT_TEST
(
4
),
4
}},
{
float2_names
,
sizeof
(
float2_names
)/
sizeof
(
float2_names
[
0
]),{
FLOAT_TEST
(
8
),
8
}}
};
int
df_no_bin_cols
;
/* binary columns to read */
df_binary_tables_struct
df_binary_tables
[]
=
{
{
df_binary_details
,
sizeof
(
df_binary_details
)/
sizeof
(
df_binary_details
[
0
])},
{
df_binary_details_independent
,
sizeof
(
df_binary_details_independent
)/
sizeof
(
df_binary_details_independent
[
0
])}
};
/* Information about binary data structure, to be determined by the
* using and format options. This should be one greater than df_no_bin_cols.
*/
static
df_column_bininfo_struct
*
df_column_bininfo
=
NULL
;
/* allocate space as needed */
static
int
df_max_bininfo_cols
=
0
;
/* space allocated */
static
const
char
*
matrix_general_binary_conflict_msg
=
"Conflict between some matrix binary and general binary keywords"
;
#endif
/*}}} */
/* Initialize input buffer used by df_gets and df_fgets. */
/* Called via reset_command() on program entry. */
void
df_init
()
{
if
(
max_line_len
<
DATA_LINE_BUFSIZ
) {
max_line_len
=
DATA_LINE_BUFSIZ
;
df_line
=
gp_alloc
(
max_line_len
,
"datafile line buffer"
);
}
}
/*{{{ static char *df_gets() */
static
char
*
df_gets
()
{
/* HBB 20000526: prompt user for inline data, if in interactive mode */
if
(
mixed_data_fp
&&
interactive
)
fputs
(
"input data ('e' ends) > "
,
stderr
);
/* Special pseudofiles '+' and '++' return coords of sample */
if
(
df_pseudodata
)
return
df_generate_pseudodata
();
if
(
df_datablock
)
return
*
(
df_datablock_line
++
);
if
(
df_array
)
return
df_generate_ascii_array_entry
();
return
df_fgets
(
data_fp
);
}
/*}}} */
/*{{{ char *df_gets() */
/*
* This one is shared by df_gets() and by datablock.c:datablock_command
*/
char
*
df_fgets
(
FILE
*
fin
)
{
int
len
=
0
;
if
(!
fgets
(
df_line
,
max_line_len
,
fin
))
return
NULL
;
if
(
mixed_data_fp
)
++
inline_num
;
for
(;;) {
len
+=
strlen
(
df_line
+
len
);
if
(
len
>
0
&&
df_line
[
len
-
1
]
==
'\n'
) {
/* we have read an entire text-file line.
* Strip the trailing linefeed and return
*/
df_line
[
len
-
1
]
=
0
;
return
df_line
;
}
if
((
max_line_len
-
len
)
<
32
)
df_line
=
gp_realloc
(
df_line
,
max_line_len
*=
2
,
"datafile line buffer"
);
if
(!
fgets
(
df_line
+
len
,
max_line_len
-
len
,
fin
))
return
df_line
;
/* unexpected end of file, but we have something to do */
}
/* NOTREACHED */
return
NULL
;
}
/*}}} */
static
int
df_tokenise
(
char
*
s
)
{
/* implement our own sscanf that takes 'missing' into account,
* and can understand fortran quad format
*/
TBOOLEAN
in_string
;
int
i
;
/* "here data" lines may end in \n rather than \0. */
/* DOS/Windows lines may end in \r rather than \0. */
if
(
s
[
strlen
(
s
)
-
1
]
==
'\n'
||
s
[
strlen
(
s
)
-
1
]
==
'\r'
)
s
[
strlen
(
s
)
-
1
]
=
'\0'
;
for
(
i
=
0
;
i
<
MAXDATACOLS
;
i
++
)
df_tokens
[
i
]
=
NULL
;
df_no_cols
=
0
;
while
(
*
s
) {
/* We may poke at 2 new fields before coming back here - make sure there is room */
if
(
df_max_cols
<=
df_no_cols
+
2
)
expand_df_column
((
df_max_cols
<
20
) ?
df_max_cols
+
20
:
2
*
df_max_cols
);
/* have always skipped spaces at this point */
df_column
[
df_no_cols
].
position
=
s
;
in_string
=
FALSE;
/* Keep pointer to start of this token if user wanted it for
* anything, particularly if it is a string */
for
(
i
=
0
;
i
<
MAXDATACOLS
;
i
++
) {
if
(
df_no_cols
==
use_spec
[
i
].
column
-
1
) {
df_tokens
[
i
]
=
s
;
if
(
use_spec
[
i
].
expected_type
==
CT_STRING
)
df_column
[
df_no_cols
].
good
=
DF_GOOD
;
}
}
/* CSV files must accept numbers inside quotes also,
* so we step past the quote */
if
(
*
s
==
'"'
&&
df_separators
!=
NULL
) {
in_string
=
TRUE;
df_column
[
df_no_cols
].
position
=
++
s
;
}
if
(
*
s
==
'"'
) {
/* treat contents of a quoted string as single column */
in_string
=
!
in_string
;
df_column
[
df_no_cols
].
good
=
DF_STRINGDATA
;
}
else
if
(
check_missing
(
s
)) {
df_column
[
df_no_cols
].
good
=
DF_MISSING
;
df_column
[
df_no_cols
].
datum
=
not_a_number
();
df_column
[
df_no_cols
].
position
=
NULL
;
}
else
{
int
used
;
int
count
;
int
dfncp1
=
df_no_cols
+
1
;
/* optimizations by Corey Satten, corey@cac.washington.edu */
/* only scanf the field if it is mentioned in one of the using specs */
if
((
fast_columns
==
0
)
||
(
df_no_use_specs
==
0
)
||
((
df_no_use_specs
>
0
)
&&
(
use_spec
[
0
].
column
==
dfncp1
||
(
df_no_use_specs
>
1
&&
(
use_spec
[
1
].
column
==
dfncp1
||
(
df_no_use_specs
>
2
&&
(
use_spec
[
2
].
column
==
dfncp1
||
(
df_no_use_specs
>
3
&&
(
use_spec
[
3
].
column
==
dfncp1
||
(
df_no_use_specs
>
4
&&
(
use_spec
[
4
].
column
==
dfncp1
||
df_no_use_specs
>
5
)
)
)
)
)
)
)
)
)
)
) {
/* This was the [slow] code used through version 4.0
* count = sscanf(s, "%lf%n", &df_column[df_no_cols].datum, &used);
*/
/* Use strtod() because
* - it is faster than sscanf()
* - sscanf(... %n ...) may not be portable
* - it allows error checking
* - atof() does not return a count or new position
*/
char
*
next
;
df_column
[
df_no_cols
].
datum
=
strtod
(
s
,
&
next
);
used
=
next
-
s
;
count
=
(
used
) ?
1
:
0
;
}
else
{
/* skip any space at start of column */
while
(
isspace
((
unsigned
char
)
*
s
)
&&
NOTSEP
)
++
s
;
count
=
(
*
s
&&
NOTSEP
) ?
1
:
0
;
/* skip chars to end of column */
used
=
0
;
if
(
df_separators
!=
NULL
&&
in_string
) {
do
++
s
;
while
(
*
s
&&
*
s
!=
'"'
);
in_string
=
FALSE;
}
while
(!
isspace
((
unsigned
char
)
*
s
)
&&
(
*
s
!=
NUL
)
&&
NOTSEP
)
++
s
;
}
/* it might be a fortran double or quad precision.
* 'used' is only safe if count is 1
*/
if
(
df_fortran_constants
&&
count
==
1
&&
(
s
[
used
]
==
'd'
||
s
[
used
]
==
'D'
||
s
[
used
]
==
'q'
||
s
[
used
]
==
'Q'
)) {
/* HBB 20001221: avoid breaking parsing of time/date
* strings like 01Dec2000 that would be caused by
* overwriting the 'D' with an 'e'... */
char
*
endptr
;
char
save_char
=
s
[
used
];
/* might be fortran double */
s
[
used
]
=
'e'
;
/* and try again */
df_column
[
df_no_cols
].
datum
=
strtod
(
s
,
&
endptr
);
count
=
(
endptr
==
s
) ?
0
:
1
;
s
[
used
]
=
save_char
;
}
df_column
[
df_no_cols
].
good
=
count
==
1
?
DF_GOOD
:
DF_BAD
;
if
(
isnan
(
df_column
[
df_no_cols
].
datum
)) {
df_column
[
df_no_cols
].
good
=
DF_UNDEFINED
;
FPRINTF
((
stderr
,
"NaN in column %d\n"
,
df_no_cols
));
}
}
++
df_no_cols
;
/* If we are in a quoted string, skip to end of quote */
if
(
in_string
) {
do
s
++
;
while
(
*
s
&&
(
unsigned
char
)
*
s
!=
'"'
);
}
/* skip to 1st character in the next field */
if
(
df_separators
!=
NULL
&&
!
df_array
) {
/* skip to next separator or end of line */
while
((
*
s
!=
'\0'
)
&&
(
*
s
!=
'\n'
)
&&
NOTSEP
)
++
s
;
if
((
*
s
==
'\0'
)
||
(
*
s
==
'\n'
))
/* End of line; we're done */
break
;
/* step over field separator */
++
s
;
/* skip whitespace at start of next field */
while
((
*
s
==
' '
||
*
s
==
'\t'
)
&&
NOTSEP
)
++
s
;
if
((
*
s
==
'\0'
)
||
(
*
s
==
'\n'
)) {
/* Last field is empty */
df_column
[
df_no_cols
].
good
=
DF_MISSING
;
df_column
[
df_no_cols
].
datum
=
not_a_number
();
df_column
[
df_no_cols
].
position
=
NULL
;
++
df_no_cols
;
break
;
}
}
else
{
/* skip trash chars remaining in this column */
while
((
*
s
!=
'\0'
)
&&
(
*
s
!=
'\n'
)
&&
!
isspace
((
unsigned
char
)
*
s
))
++
s
;
/* skip whitespace to start of next column */
while
(
isspace
((
unsigned
char
)
*
s
)
&&
*
s
!=
'\n'
)
++
s
;
}
}
return
df_no_cols
;
}
/*{{{ static float *df_read_matrix() */
/* Reads a matrix from a text file and stores it as floats in allocated
* memory.
*
* IMPORTANT NOTE: The routine returns the memory pointer for that matrix,
* but does not retain the pointer. Maintenance of the memory is left to
* the calling code.
*/
static
float
*
df_read_matrix
(
int
*
rows
,
int
*
cols
)
{
int
max_rows
=
0
;
int
c
;
float
*
linearized_matrix
=
NULL
;
char
*
s
;
int
index
=
0
;
df_bad_matrix_values
=
0
;
*
rows
=
0
;
*
cols
=
0
;
for
(;;) {
if
(!(
s
=
df_gets
())) {
df_eof
=
1
;
/* NULL if we have not read anything yet */
return
linearized_matrix
;
}
/* skip leading spaces */
while
(
isspace
((
unsigned
char
)
*
s
)
&&
NOTSEP
)
++
s
;
/* skip blank lines and comments */
if
(!
*
s
||
is_comment
(
*
s
)) {
/* except that some comments hide an index name */
if
(
indexname
) {
while
(
is_comment
(
*
s
)
||
isspace
((
unsigned
char
)
*
s
))
++
s
;
if
(
*
s
&&
!
strncmp
(
s
,
indexname
,
strlen
(
indexname
)))
index_found
=
TRUE;
}
/* This whole section copied with minor tweaks from df_readascii() */
if
(
++
blank_count
==
1
) {
/* first blank line */
if
(
linearized_matrix
)
return
linearized_matrix
;
if
(
indexname
&&
!
index_found
)
continue
;
if
(
df_current_index
<
df_lower_index
)
continue
;
}
if
(
blank_count
==
2
) {
/* just reached the end of a data block */
++
df_current_index
;
if
(
indexname
&&
index_found
) {
df_eof
=
1
;
return
linearized_matrix
;
}
if
(
df_current_index
<=
df_lower_index
)
continue
;
if
(
df_current_index
>
df_upper_index
) {
df_eof
=
1
;
return
linearized_matrix
;
}
}
else
{
/* Ignore any blank lines beyond the 2nd */
continue
;
}
}
/* get here => was not blank */
df_last_index_read
=
df_current_index
;
/* TODO: Handle columnheaders for 2nd and subsequent data blocks?
* if (blank_count >= 2) { do something }
*/
blank_count
=
0
;
if
(
mixed_data_fp
&&
is_EOF
(
*
s
)) {
df_eof
=
1
;
return
linearized_matrix
;
}
c
=
df_tokenise
(
s
);
if
(!
c
)
return
linearized_matrix
;
/* If the first row of matrix data contains column headers */
if
(!
df_already_got_headers
&&
df_matrix_columnheaders
&&
*
rows
==
0
) {
int
i
;
char
*
temp_string
;
df_already_got_headers
=
TRUE;
for
(
i
=
(
df_matrix_rowheaders
?
1
:
0
);
i
<
c
;
i
++
) {
double
xpos
=
df_matrix_rowheaders
? (
i
-
1
) :
i
;
if
(
use_spec
[
0
].
at
) {
struct
value
a
;
df_column
[
0
].
datum
=
xpos
;
df_column
[
0
].
good
=
DF_GOOD
;
evaluate_inside_using
=
TRUE;
evaluate_at
(
use_spec
[
0
].
at
,
&
a
);
evaluate_inside_using
=
FALSE;
xpos
=
real
(
&
a
);
}
temp_string
=
df_parse_string_field
(
df_column
[
i
].
position
);
add_tic_user
(
&
axis_array
[
FIRST_X_AXIS
],
temp_string
,
xpos
,
-1
);
free
(
temp_string
);
}
continue
;
}
if
(
*
cols
&&
c
!=
*
cols
) {
/* it's not regular */
if
(
linearized_matrix
)
free
(
linearized_matrix
);
int_error
(
NO_CARET
,
"Matrix does not represent a grid"
);
}
*
cols
=
c
;
++
*
rows
;
if
(
*
rows
>
max_rows
) {
max_rows
=
GPMAX
(
2
*
max_rows
,
1
);
linearized_matrix
=
gp_realloc
(
linearized_matrix
,
*
cols
*
max_rows
*
sizeof
(
float
),
"df_matrix"
);
}
/* store data */
{
int
i
;
for
(
i
=
0
;
i
<
c
;
++
i
) {
/* First column in "matrix rowheaders" is a ytic label */
if
(
df_matrix_rowheaders
&&
i
==
0
) {
char
*
temp_string
;
double
ypos
=
*
rows
-
1
;
if
(
use_spec
[
1
].
at
) {
/* The save/restore is to make sure 1:(f($2)):3 works */
struct
value
a
;
double
save
=
df_column
[
1
].
datum
;
df_column
[
1
].
datum
=
ypos
;
evaluate_inside_using
=
TRUE;
evaluate_at
(
use_spec
[
1
].
at
,
&
a
);
evaluate_inside_using
=
FALSE;
ypos
=
real
(
&
a
);
df_column
[
1
].
datum
=
save
;
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