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statistics
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bxp.py
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statistics
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bxp.py
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"""
=======================
Boxplot drawer function
=======================
This example demonstrates how to pass pre-computed box plot
statistics to the box plot drawer. The first figure demonstrates
how to remove and add individual components (note that the
mean is the only value not shown by default). The second
figure demonstrates how the styles of the artists can
be customized.
A good general reference on boxplots and their history can be found
here: http://vita.had.co.nz/papers/boxplots.pdf
"""
import
numpy
as
np
import
matplotlib
.
pyplot
as
plt
import
matplotlib
.
cbook
as
cbook
# fake data
np
.
random
.
seed
(
19680801
)
data
=
np
.
random
.
lognormal
(
size
=
(
37
,
4
),
mean
=
1.5
,
sigma
=
1.75
)
labels
=
list
(
'ABCD'
)
# compute the boxplot stats
stats
=
cbook
.
boxplot_stats
(
data
,
labels
=
labels
,
bootstrap
=
10000
)
###############################################################################
# After we've computed the stats, we can go through and change anything.
# Just to prove it, I'll set the median of each set to the median of all
# the data, and double the means
for
n
in
range
(
len
(
stats
)):
stats
[
n
][
'med'
]
=
np
.
median
(
data
)
stats
[
n
][
'mean'
]
*=
2
print
(
list
(
stats
[
0
]))
fs
=
10
# fontsize
###############################################################################
# Demonstrate how to toggle the display of different elements:
fig
,
axes
=
plt
.
subplots
(
nrows
=
2
,
ncols
=
3
,
figsize
=
(
6
,
6
),
sharey
=
True
)
axes
[
0
,
0
].
bxp
(
stats
)
axes
[
0
,
0
].
set_title
(
'Default'
,
fontsize
=
fs
)
axes
[
0
,
1
].
bxp
(
stats
,
showmeans
=
True
)
axes
[
0
,
1
].
set_title
(
'showmeans=True'
,
fontsize
=
fs
)
axes
[
0
,
2
].
bxp
(
stats
,
showmeans
=
True
,
meanline
=
True
)
axes
[
0
,
2
].
set_title
(
'showmeans=True,
\n
meanline=True'
,
fontsize
=
fs
)
axes
[
1
,
0
].
bxp
(
stats
,
showbox
=
False
,
showcaps
=
False
)
tufte_title
=
'Tufte Style
\n
(showbox=False,
\n
showcaps=False)'
axes
[
1
,
0
].
set_title
(
tufte_title
,
fontsize
=
fs
)
axes
[
1
,
1
].
bxp
(
stats
,
shownotches
=
True
)
axes
[
1
,
1
].
set_title
(
'notch=True'
,
fontsize
=
fs
)
axes
[
1
,
2
].
bxp
(
stats
,
showfliers
=
False
)
axes
[
1
,
2
].
set_title
(
'showfliers=False'
,
fontsize
=
fs
)
for
ax
in
axes
.
flatten
():
ax
.
set_yscale
(
'log'
)
ax
.
set_yticklabels
([])
fig
.
subplots_adjust
(
hspace
=
0.4
)
plt
.
show
()
###############################################################################
# Demonstrate how to customize the display different elements:
boxprops
=
dict
(
linestyle
=
'--'
,
linewidth
=
3
,
color
=
'darkgoldenrod'
)
flierprops
=
dict
(
marker
=
'o'
,
markerfacecolor
=
'green'
,
markersize
=
12
,
linestyle
=
'none'
)
medianprops
=
dict
(
linestyle
=
'-.'
,
linewidth
=
2.5
,
color
=
'firebrick'
)
meanpointprops
=
dict
(
marker
=
'D'
,
markeredgecolor
=
'black'
,
markerfacecolor
=
'firebrick'
)
meanlineprops
=
dict
(
linestyle
=
'--'
,
linewidth
=
2.5
,
color
=
'purple'
)
fig
,
axes
=
plt
.
subplots
(
nrows
=
2
,
ncols
=
2
,
figsize
=
(
6
,
6
),
sharey
=
True
)
axes
[
0
,
0
].
bxp
(
stats
,
boxprops
=
boxprops
)
axes
[
0
,
0
].
set_title
(
'Custom boxprops'
,
fontsize
=
fs
)
axes
[
0
,
1
].
bxp
(
stats
,
flierprops
=
flierprops
,
medianprops
=
medianprops
)
axes
[
0
,
1
].
set_title
(
'Custom medianprops
\n
and flierprops'
,
fontsize
=
fs
)
axes
[
1
,
0
].
bxp
(
stats
,
meanprops
=
meanpointprops
,
meanline
=
False
,
showmeans
=
True
)
axes
[
1
,
0
].
set_title
(
'Custom mean
\n
as point'
,
fontsize
=
fs
)
axes
[
1
,
1
].
bxp
(
stats
,
meanprops
=
meanlineprops
,
meanline
=
True
,
showmeans
=
True
)
axes
[
1
,
1
].
set_title
(
'Custom mean
\n
as line'
,
fontsize
=
fs
)
for
ax
in
axes
.
flatten
():
ax
.
set_yscale
(
'log'
)
ax
.
set_yticklabels
([])
fig
.
suptitle
(
"I never said they'd be pretty"
)
fig
.
subplots_adjust
(
hspace
=
0.4
)
plt
.
show
()
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