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Fix MethodBinding/OverloadMapper memory leak (#691) (#2719) · pythonnet/pythonnet@ca323cc · GitHub

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Commit ca323cc

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greateggsgreg
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filmor
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Fix MethodBinding/OverloadMapper memory leak (#691) (#2719)
* Fix MethodBinding/OverloadMapper memory leak (#691) MethodBinding and OverloadMapper held PyObject `target` references that were not disposed during tp_clear, leaving Python-side refcount drops to wait on the multi-hop .NET finalizer chain. They also shared the same C# PyObject instance across mp_subscript/Overloads paths, so freeing one could free the underlying Python object out from under the others. - ExtensionType: add virtual OnClear() hook called from tp_clear before the GCHandle is released, letting subclasses eagerly drop owned Python references. - MethodBinding/OverloadMapper: override OnClear to dispose `target`. (`targetType` is intentionally not disposed since Python types are long-lived and tracked by other caches.) - Take an independent INCREF'd PyObject copy at every site that hands a shared target into a new MethodBinding or OverloadMapper, so each wrapper owns its own reference. Result: the three _does_not_leak_memory tests drop from ~485 MB delta to ~10 KB delta on Python 3.14. * Tighten leak-test threshold to 10% to actually fail the bug The previous 90% threshold (0.9 MB/iter against a 1 MB allocation) documented the issue but did not reproduce it: master leaks ~600-765 KB/iter, which the 0.9 MB threshold accepts as passing. Drop the threshold to 10% (104 KB/iter). On the 2026-05-09 verification run with Python 3.14 GIL on linux-aarch64: Without fix (master): ~572-765 KB/iter (FAIL) With fix (this branch): ~-500 B/iter (PASS) Margin is roughly 6x in either direction across .NET 8 and .NET 10, so the threshold cleanly separates buggy from fixed states without being sensitive to GC noise. * Bugfix and improvements - Handle the `PyType` reference in `OverloadMapper` and `MethodBinding` in the same way as the object reference - Unconditionally store the `PyType` of the object - Introduce `NewReference` helper function for the object and type passing - Fix the remaining missing reference count bump for the type (`MethodObject`) - As the count is now correct, `Dispose` the type as well --------- Co-authored-by: Benedikt Reinartz <filmor@gmail.com>
1 parent 25e0ccf commit ca323cc

7 files changed

Lines changed: 55 additions & 19 deletions

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‎src/runtime/PythonTypes/PyObject.cs‎

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@@ -93,6 +93,12 @@ internal PyObject(in StolenReference reference)
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Finalizer.Instance.ThrottledCollect();
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}
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/// <summary>
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/// Create a new PyObject instance of this object, bumping the reference
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/// count.
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/// </summary>
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public PyObject NewReference() => new(this);
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// Ensure that encapsulated Python object is decref'ed appropriately
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// when the managed wrapper is garbage-collected.
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~PyObject()

‎src/runtime/PythonTypes/PyType.cs‎

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@@ -35,6 +35,12 @@ internal PyType(in StolenReference reference, bool prevalidated = false) : base(
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throw new ArgumentException("object is not a type");
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}
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/// <summary>
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/// Create a new PyType instance of this object, bumping the reference
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/// count.
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/// </summary>
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public new PyType NewReference() => new(this);
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protected PyType(SerializationInfo info, StreamingContext context) : base(info, context) { }
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internal new static PyType? FromNullableReference(BorrowedReference reference)

‎src/runtime/Types/ExtensionType.cs‎

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@@ -84,8 +84,18 @@ public unsafe static void tp_dealloc(NewReference lastRef)
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DecrefTypeAndFree(lastRef.Steal());
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}
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/// <summary>
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/// Called during tp_clear before the GCHandle is released.
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/// Override to eagerly dispose Python object references (PyObject fields)
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/// held by the subclass, preventing the multi-hop .NET finalizer chain
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/// from delaying Python-side refcount decrements.
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/// </summary>
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protected virtual void OnClear() { }
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public static int tp_clear(BorrowedReference ob)
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{
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(GetManagedObject(ob) as ExtensionType)?.OnClear();
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var weakrefs = Runtime.PyObject_GetWeakRefList(ob);
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if (weakrefs != null)
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{

‎src/runtime/Types/MethodBinding.cs‎

Lines changed: 12 additions & 8 deletions
Original file line numberDiff line numberDiff line change
@@ -18,14 +18,12 @@ internal class MethodBinding : ExtensionType
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internal MaybeMethodInfo info;
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internal MethodObject m;
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internal PyObject? target;
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internal PyType? targetType;
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internal PyType targetType;
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public MethodBinding(MethodObject m, PyObject? target, PyType? targetType = null)
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public MethodBinding(MethodObject m, PyObject? target, PyType targetType)
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{
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this.target = target;
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this.targetType = targetType ?? target?.GetPythonType();
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this.targetType = targetType;
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this.info = null;
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this.m = m;
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}
@@ -54,7 +52,7 @@ public static NewReference mp_subscript(BorrowedReference tp, BorrowedReference
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}
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MethodObject overloaded = self.m.WithOverloads(overloads);
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var mb = new MethodBinding(overloaded, self.target, self.targetType);
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var mb = new MethodBinding(overloaded, self.target?.NewReference(), self.targetType.NewReference());
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return mb.Alloc();
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}
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@@ -141,7 +139,7 @@ public static NewReference tp_getattro(BorrowedReference ob, BorrowedReference k
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// FIXME: deprecate __overloads__ soon...
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case "__overloads__":
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case "Overloads":
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var om = new OverloadMapper(self.m, self.target);
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var om = new OverloadMapper(self.m, self.target?.NewReference(), self.targetType.NewReference());
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return om.Alloc();
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case "__signature__" when Runtime.InspectModule is not null:
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var sig = self.Signature;
@@ -249,7 +247,6 @@ public static NewReference tp_call(BorrowedReference ob, BorrowedReference args,
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}
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}
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/// <summary>
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/// MethodBinding __hash__ implementation.
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/// </summary>
@@ -281,5 +278,12 @@ public static NewReference tp_repr(BorrowedReference ob)
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string name = self.m.name;
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return Runtime.PyString_FromString($"<{type} method '{name}'>");
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}
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protected override void OnClear()
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{
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target?.Dispose();
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targetType.Dispose();
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target = null;
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}
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}
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}

‎src/runtime/Types/MethodObject.cs‎

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -197,7 +197,7 @@ public static NewReference tp_descr_get(BorrowedReference ds, BorrowedReference
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&& self.type.Value.IsInstanceOfType(obj.inst))
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{
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var basecls = ReflectedClrType.GetOrCreate(self.type.Value);
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return new MethodBinding(self, new PyObject(ob), basecls).Alloc();
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return new MethodBinding(self, new PyObject(ob), basecls.NewReference()).Alloc();
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}
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return new MethodBinding(self, target: new PyObject(ob), targetType: new PyType(tp)).Alloc();

‎src/runtime/Types/OverloadMapper.cs‎

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Original file line numberDiff line numberDiff line change
@@ -10,11 +10,13 @@ namespace Python.Runtime
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internal class OverloadMapper : ExtensionType
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{
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private readonly MethodObject m;
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private readonly PyObject? target;
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private PyObject? target;
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readonly PyType targetType;
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public OverloadMapper(MethodObject m, PyObject? target)
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public OverloadMapper(MethodObject m, PyObject? target, PyType targetType)
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{
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this.target = target;
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this.targetType = targetType;
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this.m = m;
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}
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@@ -42,7 +44,7 @@ public static NewReference mp_subscript(BorrowedReference tp, BorrowedReference
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return Exceptions.RaiseTypeError(e);
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}
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var mb = new MethodBinding(self.m, self.target) { info = mi };
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var mb = new MethodBinding(self.m, self.target?.NewReference(), self.targetType.NewReference()) { info = mi };
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return mb.Alloc();
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}
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@@ -54,5 +56,12 @@ public static NewReference tp_repr(BorrowedReference op)
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var self = (OverloadMapper)GetManagedObject(op)!;
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return self.m.GetDocString();
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}
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protected override void OnClear()
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{
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target?.Dispose();
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targetType.Dispose();
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target = null;
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}
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}
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}

‎tests/test_method.py‎

Lines changed: 8 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -983,9 +983,10 @@ def test_getting_generic_method_binding_does_not_leak_memory(memory_usage_tracki
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bytesAllocatedPerIteration = pow(2, 20) # 1MB
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bytesLeakedPerIteration = processBytesDelta / iterations
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# Allow 90% threshold - this shows the original issue is fixed, which leaks the full allocated bytes per iteration
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# Increased from 50% to ensure that it works on Windows with Python >3.13
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failThresholdBytesLeakedPerIteration = bytesAllocatedPerIteration * 0.9
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# Tight 10% threshold: with the fix the per-iteration leak is essentially
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# zero, while the bug retains the bulk of the 1 MB payload (~600 KB/iter
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# on 3.14 GIL). 100 KB/iter cleanly distinguishes the two states.
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failThresholdBytesLeakedPerIteration = bytesAllocatedPerIteration * 0.1
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assert bytesLeakedPerIteration < failThresholdBytesLeakedPerIteration
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@@ -1025,8 +1026,8 @@ def test_getting_overloaded_method_binding_does_not_leak_memory(memory_usage_tra
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bytesAllocatedPerIteration = pow(2, 20) # 1MB
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bytesLeakedPerIteration = processBytesDelta / iterations
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# Allow 90% threshold - this shows the original issue is fixed, which leaks the full allocated bytes per iteration
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failThresholdBytesLeakedPerIteration = bytesAllocatedPerIteration * 0.9
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# Tight 10% threshold; see test_getting_generic_method_binding_does_not_leak_memory.
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failThresholdBytesLeakedPerIteration = bytesAllocatedPerIteration * 0.1
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assert bytesLeakedPerIteration < failThresholdBytesLeakedPerIteration
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@@ -1068,8 +1069,8 @@ def test_getting_method_overloads_binding_does_not_leak_memory(memory_usage_trac
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bytesAllocatedPerIteration = pow(2, 20) # 1MB
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bytesLeakedPerIteration = processBytesDelta / iterations
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# Allow 90% threshold - this shows the original issue is fixed, which leaks the full allocated bytes per iteration
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failThresholdBytesLeakedPerIteration = bytesAllocatedPerIteration * 0.9
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# Tight 10% threshold; see test_getting_generic_method_binding_does_not_leak_memory.
1073+
failThresholdBytesLeakedPerIteration = bytesAllocatedPerIteration * 0.1
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assert bytesLeakedPerIteration < failThresholdBytesLeakedPerIteration
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