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Commits · smithlabcode/rmap · GitHub

Commits

Commits on Jul 21, 2015

removed trailing whitespace, broke long lines, and changed all tabs to spaces
andrewdavidsmith
committed
a27b3bf

Commits on Nov 26, 2014

Fix the bug: the default values for the start and increment were swapped.
xjlizji
committed
9724b7c

Commits on Nov 21, 2014

Merge pull request #8 from saketkc/mac_fixes
pjuren
committed
c7436db
Add travis.yml for CI
saketkc
committed
a3df393
Add .gitignore
saketkc
committed
dafc2ff
Add .gitignore, .travis for CI
saketkc
committed
5d27d4d
Fix Makefile for OSX > 10.9
saketkc
committed
bc64a19

Commits on Nov 14, 2014

Commits on Nov 12, 2014

delete relative path for smithlab_cpp
chenhaifeng9
committed
1466663
change variable name from 'tmp' to meanful ones
chenhaifeng9
committed
75a64db

Commits on Nov 11, 2014

build index(hash table) for reference genome
chenhaifeng9
committed
36a7559

Commits on Oct 27, 2014

Revert the master branch to the latest stable revion as Liz requested.
mengzhou
committed
07cbeaf

Commits on Jul 31, 2014

restore the old stabel version. Updation only happens after the success of all testings.
Xiaojing Ji
committed
3b50b85

Commits on Jul 23, 2014

change the way to load reads
xjlizji
committed
6890e0b
change the way to load reads.
xjlizji
committed
dcbdd18

Commits on Jul 17, 2014

Added utils as submodule.
Meng Zhou
committed
58077ba

Commits on May 25, 2014

Commits on Jan 13, 2014

Remove suffix_len option
chaodeng
committed
61c2ab9
remove suffix_len option in rmap-pe
chaodeng
committed
20c9a0d

Commits on Jul 19, 2013

Not needed anymore
andrewdavidsmith
committed
b3f5a5f
Bye bye...
andrewdavidsmith
committed
eaa3393

Commits on Dec 29, 2012

The SRC_ROOT variable is causing problems. Still not great.
no_author
committed
d5a5b10

Commits on Dec 28, 2012

changes to dependencies to reflect the move of clip_adaptor_from_reads back into the rmap common
no_author
committed
e7c0449
Adding this version of rmap-pe now because all the work was done for the bisulfite version. Likely deprecate the other one soon.
no_author
committed
25a66be
changes to dependencies to reflect the move of clip_adaptor_from_reads back into the rmap common
no_author
committed
22470d8
Cleaned up some code dealing with option parsing help
no_author
committed
cd0a962
Reverted back to the seven seeks. Updated code to reflect changes in the adaptor clipping and the max mismatches parameter no longer passed into the load_reads function
no_author
committed
ae4aff4
Removed some incorrect comments and incorrect help messages
no_author
committed
85fbf23
Removed the required argument for max number of mismatches because no longer used.
no_author
committed
0bd3fb6

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