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Duke Center for Genomic and Computational Biology · GitHub

Duke Center for Genomic and Computational Biology

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GCB-Dockerfiles GCB-Dockerfiles Public

Docker images for bioinformatic workflows that are built on Docker Hub under the DukeGCB organization.

Python 7 4
bespin-cwl bespin-cwl Public archive

CWL workflows for Bespin

Common Workflow Language 4 3
DukeDSClient DukeDSClient Public

Command line program to allow uploading, downloading, and managing projects in the duke-data-service.

Python 5 6
gcb-ansible-roles gcb-ansible-roles Public

Ansible roles used by GCB Ansible Playbooks

Jinja
iMADS iMADS Public

Web portal and supporting services that allow searching/creating TF predictions and preferences.

JavaScript 1
calrissian calrissian Public

CWL on Kubernetes

Python 54 22

Repositories

Type Language Sort

calrissian Public
CWL on Kubernetes

Duke-GCB/calrissian's past year of commit activity

Python 54 MIT 22 30 (2 issues need help) 2 Updated Feb 4, 2026
biostat-823 Public
Teaching materials for Biostat 823 course

Duke-GCB/biostat-823's past year of commit activity

JavaScript 1 0 0 0 Updated Feb 5, 2025
biostat-jupyter Public
Jupyter Lab container for Biostat courses

Duke-GCB/biostat-jupyter's past year of commit activity

Dockerfile 0 MIT 0 0 0 Updated Nov 27, 2024
jupysql-utils Public Forked from ploomber/core
Utilities module used by jupysql.

Duke-GCB/jupysql-utils's past year of commit activity

Python 0 Apache-2.0 9 0 0 Updated Sep 9, 2024
jupysql Public Forked from ploomber/jupysql
Better SQL in Jupyter. 📊

Duke-GCB/jupysql's past year of commit activity

Python 0 Apache-2.0 383 0 0 Updated Sep 9, 2024
DukeDSClient Public
Command line program to allow uploading, downloading, and managing projects in the duke-data-service.

Duke-GCB/DukeDSClient's past year of commit activity

Python 5 MIT 6 27 1 Updated Jun 11, 2024
majoros-python-utils Public Forked from bmajoros/python
Majoros lab python modules and scripts

Duke-GCB/majoros-python-utils's past year of commit activity

Python 0 4 0 1 Updated May 24, 2024
iMADS Public
Web portal and supporting services that allow searching/creating TF predictions and preferences.

Duke-GCB/iMADS's past year of commit activity

JavaScript 0 MIT 1 6 2 Updated Jan 31, 2024
2023-08-23-duke Public
Website for the 2023 UPGG Informatics Orientation Bootcamp

Duke-GCB/2023-08-23-duke's past year of commit activity

HTML 0 1 0 0 Updated Aug 26, 2023
scicomp-python Public Forked from dleehr/scicomp-python
Python lesson for GCB Academy: Intro to Scientific Computing

Duke-GCB/scicomp-python's past year of commit activity

Jupyter Notebook 1 8 0 0 Updated Aug 24, 2023

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