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HT Genome Analysis Unit · GitHub

HT Genome Analysis Unit

Genome Analysis Unit in the Population Genomic theme

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  1. SCE-VCF SCE-VCF Public

    Sample Contamination Estimate from VCF

    Nim 21 1

  2. nf-pipeline-regenie nf-pipeline-regenie Public

    GWAS and rare variants tests at high speed using regenie

    Nextflow 16 4

  3. Useful_tips Useful_tips Public

    Tips for various bioinformatic tasks

    7

  4. rsid_tools rsid_tools Public

    Small utilities to play with dbSNP rsID: annotate rsID for a var or get position for an rsID

    Nim 5

  5. csq_selector csq_selector Public

    Filter and select variant consequence annotations from snpEff, VEP or bcftools

    Nim 4

  6. nim-simpleargs nim-simpleargs Public

    A simple command line argument parser with minimum dependencies

    Nim 4

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