Josh Loecker JoshLoecker

I like tool development

7 followers · 4 following

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Overview Repositories 38 Projects Packages Stars 51

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joshloecker/README.md

Josh Loecker

I am currently a Postdoctoral research associate at the University of Nebraska-Lincoln. I specialize in high-performance data pipelines, bioinformatics workflows, constraint-based metabolic modeling, and applying LLM/AI workflows.

Personal Website

My full portfolio, project details, and resume have moved to my self-hosted website:

joshloecker.com

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HelikarLab/COMO HelikarLab/COMO Public

Identify drug targets and potentially repurposable drugs for metabolism-impacting diseases

Python 11 7
HelikarLab/FastqToGeneCounts HelikarLab/FastqToGeneCounts Public

This is an automated pipeline to map SRR files to gene counts

Python 3 2
MAPT MAPT Public

The purpose of this project is to map Oxford Nanopore Sequencing data down to the species level

Python 1

JoshLoecker (Josh Loecker) · GitHub