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Forked from ph4s3r/echino-class
Implementing deep learning models for the classification of Echinococcus multilocularis infection in human liver tissue
Jupyter Notebook 1
Forked from nolanlab/CODEX
Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation
Java
Forked from nolanlab/NeighborhoodCoordination
Code accompanying our manuscript "Coordinated cellular neighborhoods orchestrate antitumoral immunity at the colorectal cancer invasive front"
Jupyter Notebook
Forked from will-yx/CellSeg-CRISP
Modified CellSeg nuclei segmenter that is compatible with stitched output images of the CRISP-CODEX processor
Python
Forked from will-yx/CRISP-CODEX-Processor
Convolutional Registration of Images at Sub-Pixel resolution
Python
Forked from nolanlab/SpatialScore
R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in cutaneous T cell lymphoma".
R 1
Implementing deep learning models for the classification of Echinococcus multilocularis infection in human liver tissue
A customizable, user-friendly and open-source visual assessment tool for histological slides
Image processing software for CODEX: driftcompensation, deconvolution, uploading and segmentation
Modified CellSeg nuclei segmenter that is compatible with stitched output images of the CRISP-CODEX processor
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