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TF-Chan-Lab

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panGraphViewer panGraphViewer Public

Show pangenome graphs in an easy way

JavaScript 61 5
OMBlast OMBlast Public

An alignment tool for optical mapping data

Java 10 3
OMTools OMTools Public

A software package for optical mapping data processing, analysis and visualization

Java 9 5
miRDeep-P2_pipeline miRDeep-P2_pipeline Public

Perl 9
ViralFusionSeq ViralFusionSeq Public

Accurately discover viral integration events and fusion transcripts

Perl 7 2
LAFITE LAFITE Public

tool for long read transcriptome assembly

Jupyter Notebook 4 2

Repositories

Type Language Sort

panGraphViewer Public
Show pangenome graphs in an easy way

TF-Chan-Lab/panGraphViewer's past year of commit activity

JavaScript 61 MIT 5 8 0 Updated Aug 7, 2025
miRDeep-P2_pipeline Public

TF-Chan-Lab/miRDeep-P2_pipeline's past year of commit activity

Perl 9 GPL-3.0 0 2 0 Updated Feb 24, 2024
ViralFusionSeq Public
Accurately discover viral integration events and fusion transcripts

TF-Chan-Lab/ViralFusionSeq's past year of commit activity

Perl 7 GPL-3.0 2 2 0 Updated Oct 13, 2023
rG4-seeker Public

TF-Chan-Lab/rG4-seeker's past year of commit activity

Python 3 GPL-3.0 2 2 0 Updated Aug 31, 2023
LAFITE Public
tool for long read transcriptome assembly

TF-Chan-Lab/LAFITE's past year of commit activity

Jupyter Notebook 4 Apache-2.0 2 1 0 Updated Aug 24, 2023
miRDeep2_pipeline Public

TF-Chan-Lab/miRDeep2_pipeline's past year of commit activity

Perl 1 GPL-3.0 0 0 0 Updated Jun 27, 2021
CAG_RNA_toxicity Public
This repository is for depositing codes used in the manuscript, titled "CAG RNAs induce DNA damage and apoptosis by silencing NUDT16 expression in polyglutamine degeneration".

TF-Chan-Lab/CAG_RNA_toxicity's past year of commit activity

Perl 0 GPL-3.0 0 0 0 Updated May 6, 2021
OMTools Public
A software package for optical mapping data processing, analysis and visualization

TF-Chan-Lab/OMTools's past year of commit activity

Java 9 5 4 0 Updated Jun 19, 2020
OMBlast Public
An alignment tool for optical mapping data

TF-Chan-Lab/OMBlast's past year of commit activity

Java 10 3 2 0 Updated May 29, 2020

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