TheHumphreysLab
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CellScopes.jl CellScopes.jl Public
Forked from HaojiaWu/CellScopes.jl
A Julia package for single cell and spatial data analysis
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sci-RNA-seq-kidney sci-RNA-seq-kidney Public
Scripts used in the project of profiling mouse kidney fibrogenesis with sci-RNA-seq3 (Cell Metabolism 2022)
Repositories
- CellPilot Public Forked from HaojiaWu/CellPilot
CellPilot is a serverless, AI-powered desktop application for chat-based single-cell and spatial transcriptomics analysis.
- CellPilot_manuscript_reproducible_script Public
This is a repo for reproducing the figures in our CellPilot paper
- SpatialBrowser Public Forked from HaojiaWu/SpatialBrowser
A Flask web app for joint visualization of multimodal spatial transcriptomics data
- IRI_Xenium_Visium Public
- CellScopes.jl Public Forked from HaojiaWu/CellScopes.jl
A Julia package for single cell and spatial data analysis
- SHARE-seq-kidney Public
Scripts generating data for our study of human kidney anatomical regions with SHARE-seq and imaging mass spectrometry (Cell Metabolism 2024)
- kidney_anatomy_chromatin Public
Scripts used in our study of chromatin interaction and modification profiling across human kidney anatomic regions (Scientific Data 2024)
- MALDIpy Public
MALDIpy: a Python package for single-cell analysis of imaging mass spectrometry data (Cell Metabolism 2024)
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