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benoitballester (Benoit Ballester) · GitHub

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  1. ExonEnhancer ExonEnhancer Public

    Code repository for the research paper "Exonic Enhancers emerge as a common feature of gene regulation"

    Jupyter Notebook

  2. UponRequest UponRequest Public

    Text mining and analysis of “data available upon request” statements in scientific articles.

    Jupyter Notebook

  3. Pol2Atlas Pol2Atlas Public

    Code repository for the research paper "Characterising intergenic transcription at RNA polymerase II binding sites in normal and cancer tissues" by Pierre de Langen et al.

    Python 2

  4. muffin muffin Public

    MUFFIN : A suite of generic tools for the analysis of count-based sequencing data

  5. remap-cisreg/ReMapEnrich remap-cisreg/ReMapEnrich Public

    ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, auto…

    HTML 17 5

  6. remap-cisreg/remap-pipeline remap-cisreg/remap-pipeline Public

    As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMap team and external teams. This is es…

    Python 8 6

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