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camilolaiton (Camilo Laiton) · GitHub

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camilolaiton/README.md

Hello! I am Camilo Laiton 🇨🇴

  • Computer Vision Engineer at the Allen Institute for Neural Dynamics.
  • M.Sc. National University of Colombia.
  • Currently working on cloud image processing pipelines for large-scale light-sheet microscope images. Some projects I am working on are brain image registration, image segmentation, RNA detection and image processing evaluation.




🌆 Seattle, WA.

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  1. AllenNeuralDynamics/aind-smartspim-pipeline AllenNeuralDynamics/aind-smartspim-pipeline Public

    Repository that hosts the SmartSPIM pipeline code

    Nextflow 6 3

  2. AllenNeuralDynamics/aind-large-scale-cellpose AllenNeuralDynamics/aind-large-scale-cellpose Public

    Large-scale cell segmentation with cellpose.

    Python 10

  3. AllenNeuralDynamics/aind-z1-spot-detection AllenNeuralDynamics/aind-z1-spot-detection Public

    Scripts to detect spots on Z1 data

    Python 2

  4. SelfAttention3DBrainSegmentation SelfAttention3DBrainSegmentation Public

    Code for my master thesis

    Jupyter Notebook 1

  5. AllenNeuralDynamics/aind-large-scale-prediction AllenNeuralDynamics/aind-large-scale-prediction Public

    Large-scale prediction framework

    Python 2

  6. AllenNeuralDynamics/aind-smartspim-stitch AllenNeuralDynamics/aind-smartspim-stitch Public

    Stitching and fusion pipeline in the cloud

    Python 4 2

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