Computational Biology and Machine Intelligence
- 10 followers
- Beijing, China
- https://cbmi-group.github.io
- jinjie2015@ia.ac.cn
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FFM-Multi-Decoder-Network FFM-Multi-Decoder-Network Public
The official code repository for the ECCV 2024 accepted paper "Representing Topological Self-Similarity Using Fractal Feature Maps for Accurate Segmentation of Tubular Structures".
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3DFastParticleDetection 3DFastParticleDetection Public
A one-stage detection model that locates and classifies particles in 3D tomograms.
Python 4
Repositories
- IsoVEM Public
IsoVEM: Accurate and Robust Isotropic Reconstruction for Volume Electron Microscopy Using a Video Transformer
- protlocnet Public
This repository is the official implementation of ProtLocNet: Morphology-Aware Self-Supervised Representation Learning of Protein Localization in Single Cells.
- segmentation-baseline Public
It includes six basic models (UNet, ResUNet, AttUNet, UNet++, U^2Net, Swin-UNETR), along with prediction code and metric evaluation code. Furthermore, the evaluation module can detect inaccurately annotated images in the dataset by identifying excessively large HD95 metrics.
- ED-Diff Public
Implementation for the paper "Diffusion Prior-based Zero-Shot Denoising for Real-World Fluorescence Microscopy Images via Encoder-Decoder Guided Sampling".
- scarf Public
A foundation model designed for learning the representation of scRNA-seq and scATAC-seq data.
- MRE Public
- DeepETPicker Public
- FFM-Multi-Decoder-Network Public
The official code repository for the ECCV 2024 accepted paper "Representing Topological Self-Similarity Using Fractal Feature Maps for Accurate Segmentation of Tubular Structures".
- Improve-Robustness-of-ICS Public
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