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Computational RNA Biology group · GitHub

Computational RNA Biology group

Computational RNA Biology group

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  1. riser riser Public

    Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing

    Python 15 5

  2. R2Dtool R2Dtool Public

    Analyse RNA feature distributions.

    Jupyter Notebook 21 4

  3. RATTLE RATTLE Public

    Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

    C++ 63 11

  4. SUPPA SUPPA Public

    SUPPA: Fast quantification of splicing and differential splicing

    Python 307 62

  5. SWARM SWARM Public

    Single-molecule Workflow for Analysing RNA Modifications

    Python 9 1

  6. modkitopt modkitopt Public

    Optimise modkit parameters and stoichiometry cutoff for accurate nanopore-based RNA modification detection

    Nextflow 8

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