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C.albicans-ml-pipeline C.albicans-ml-pipeline Public

Pipeline of building a machine learning model to identify C. albicans gene essentiality

Python 5
BridGE-Python BridGE-Python Public

BridGE: a pathway-based analysis tool for detecting genetic interactions from GWAS

Python 5 1
SGA_Public SGA_Public Public

Compute genetic interactions from SGA output of colony sizes in yeast.

MATLAB 4
CG-TARGET CG-TARGET Public

R 2 5
barseq_counter barseq_counter Public

A simple tool for demultiplexing barcode sequencing experiments.

Python 2 1
BEAN-counter BEAN-counter Public

Python 1 2

Repositories

Type Language Sort

orobas Public

csbio/orobas's past year of commit activity

R 0 MIT 0 0 0 Updated Jul 17, 2026
GIN Public

csbio/GIN's past year of commit activity

Jupyter Notebook 1 MIT 0 0 0 Updated Jun 17, 2026
qGI Public
Documented R code for the identification of quantitative genetic interactions from CRISPR screens

csbio/qGI's past year of commit activity

R 0 MIT 3 0 0 Updated Feb 23, 2026
DeepSLP Public
Leveraging cancer dependency data to predict synthetic lethality in human cells

csbio/DeepSLP's past year of commit activity

0 MIT 0 0 0 Updated Jul 18, 2025
Calbicans_invivo_pipeline Public Forked from Karashan/Calbicans_invivo_pipeline
C. albicans in vivo scoring pipeline

csbio/Calbicans_invivo_pipeline's past year of commit activity

Python 0 1 0 0 Updated Jul 5, 2025
C.albicans_in_vitro_pipeline Public
Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions

csbio/C.albicans_in_vitro_pipeline's past year of commit activity

Jupyter Notebook 0 MIT 0 0 0 Updated Nov 22, 2024
C.albicansDataHub Public

csbio/C.albicansDataHub's past year of commit activity

Mathematica 0 0 0 0 Updated Jun 23, 2024
BridGE-Python Public
BridGE: a pathway-based analysis tool for detecting genetic interactions from GWAS

csbio/BridGE-Python's past year of commit activity

Python 5 1 0 0 Updated Jun 24, 2023
CSBIO-Website Public Forked from MeeshCompBio/CSBIO-Website

csbio/CSBIO-Website's past year of commit activity

HTML 1 1 0 0 Updated Aug 24, 2022
BEAN-counter Public

csbio/BEAN-counter's past year of commit activity

Python 1 2 3 0 Updated Aug 11, 2022