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dburkhardt (Daniel Burkhardt) · GitHub

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  1. KrishnaswamyLab/PHATE KrishnaswamyLab/PHATE Public

    PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.

    Python 558 82

  2. KrishnaswamyLab/scprep KrishnaswamyLab/scprep Public

    A collection of scripts and tools for loading, processing, and handling single cell data.

    Python 77 21

  3. KrishnaswamyLab/MELD KrishnaswamyLab/MELD Public

    Quantifying experimental perturbations at single cell resolution

    Python 116 10

  4. KrishnaswamyLab/graphtools KrishnaswamyLab/graphtools Public

    Tools for building and manipulating graphs in Python

    Python 46 17

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