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Fixes for package installation error with BiocParallel version 1.30.0 by jasenfinch · Pull Request #8 · futureverse/BiocParallel.FutureParam · GitHub

/ BiocParallel.FutureParam Public

Fixes for package installation error with BiocParallel version 1.30.0 - #8

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Fixes for package installation error with BiocParallel version 1.30.0#8
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jasenfinch commented Apr 30, 2022

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Fixes for the following error during package installation with the update of BiocParallel to version 1.30.0

* installing *source* package ‘BiocParallel.FutureParam’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error : in method for ‘bpiterate’ with signature ‘ITER="ANY",FUN="ANY",BPPARAM="FutureParam"’:  arguments (‘BPREDO’, ‘BPPARAM’, ‘BPOPTIONS’) after ‘...’ in the generic must appear in the method, in the same place at the end of the argument list
Error: unable to load R code in package ‘BiocParallel.FutureParam’
Execution halted
  • The missing arguments BPREDO and BPOPTIONS have been added to the bpiterate method.
  • Update the arguments specified in .composeTry in methods bpiterate and bpapply.

Other minor fixes include:

  • Addition of future.batchtools to the suggests field in DESCRIPTION.

jasenfinch changed the title Fix package installation error with BiocParallel version 1.30.0 Fixes for package installation error with BiocParallel version 1.30.0 Apr 30, 2022
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