Spanish National Bioinformatics Institute

Alfonso Valencia | BSC, ICREA, INB Director - Salvador Capella-Gutierrez | BSC, INB CTO

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trimal trimal Public

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

C++ 269 48
BIOLITMAP BIOLITMAP Public

Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.

Python 21 3
WfExS-backend WfExS-backend Public

Workflow Execution Service Backend

Python 21 6
openVRE openVRE Public

Open Virtual Research Environment

PHP 13 4
SmartRNASeqCaller SmartRNASeqCaller Public

SmartRNASeqCaller is a post-processing pipeline to improve germline variant calling from RNA-Seq data

Python 7 3
rd-connect-cas-overlay rd-connect-cas-overlay Public archive

Forked from UniconLabs/simple-cas4-overlay-template

RD-Connect CAS overlay

Shell 6 2

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trimal Public
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

inab/trimal's past year of commit activity

C++ 269 GPL-3.0 48 34 3 Updated Aug 28, 2026
openVRE-core-dev Public
Open Virtual Research Environment development version

inab/openVRE-core-dev's past year of commit activity

PHP 0 3 3 0 Updated Aug 28, 2026
openEBench-nuxt Public
Vue Client for the OpenEBench Micro Frontends

inab/openEBench-nuxt's past year of commit activity

JavaScript 3 Apache-2.0 3 5 14 Updated Aug 28, 2026
openEBench-nuxt-v3 Public
OpenEBench Micro Frontends. Nuxt 3 version

inab/openEBench-nuxt-v3's past year of commit activity

Vue 1 Apache-2.0 0 22 0 Updated Aug 27, 2026
openVRE Public
Open Virtual Research Environment

inab/openVRE's past year of commit activity

PHP 13 Apache-2.0 4 0 2 Updated Aug 27, 2026
WfExS-backend Public
Workflow Execution Service Backend

inab/WfExS-backend's past year of commit activity

Python 21 Apache-2.0 6 28 0 Updated Aug 27, 2026
InSoLiTo Public Forked from SergiAguilo/InSoLiTo
Inferring Social Life of Tools (InSoLiTo) is an OpenEBench project that provide guidance on scientific tools worth benchmarking

inab/InSoLiTo's past year of commit activity

Python 3 MIT 2 7 0 Updated Aug 27, 2026
tessap Public
TESSAP: A docker shim which submits commands to a GA4GH TES service

inab/tessap's past year of commit activity

Python 0 Apache-2.0 0 0 3 Updated Aug 24, 2026
treecript Public Forked from chamilad/process-metrics-collector
A set of python scripts to monitor, collect, and visualize metrics of a given Linux process or a give command line

inab/treecript's past year of commit activity

Python 6 GPL-3.0 14 11 1 Updated Aug 24, 2026
github-metadata-api Public
API to extract metadata from a GitHub repository and update files.

inab/github-metadata-api's past year of commit activity

JavaScript 1 MIT 0 2 1 Updated Aug 21, 2026