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This space hosts public repositories related to software development, scientific dissemination, and research activities involving INRAE (the French National Research Institute for Agriculture, Food and Environment). Projects may be developed internally, or in collaboration with external partners.
⚠️ This GitHub organization is not the official INRAE forge.
The official forge of INRAE is https://forge.inrae.fr, which should be the primary platform for hosting institutional projects.
This GitHub organization is a complementary space, used when GitHub is specifically justified (e.g., collaborations with numerous external partners who cannot access the INRAE forge, adherences within the GitHub ecosystem, or increased visibility).
If your project is part of an international research consortium, this one might provide an umbrella under which you could host your projects. See the example of ELIXIR-Europe.
The repositories in the INRAE GitHub organization cover a wide range of topics and use cases, including:
You can browse the full list of repositories here.
Repositories can be hosted in the INRAE GitHub organization if the following conditions are met:
If you wish to host a repository under the INRAE GitHub organization, please contact by email one of the current administrators:
Please include the following information in your request:
Access will be granted on a least privilege basis to ensure clarity, traceability, and alignment with governance practices.
🙏 Thank you for contributing to the quality and visibility of open science and software at INRAE!
airGRiwrm is an extension of the airGR R package for managing semi-distributive hydrological model on an anthropized catchment.
JupyterHub based on a virtual machine built with the help of Packer, Vagrant and Ansible tools for using with VirtualBox or OpenStack.
MSpangepop generates pangenome variation graphs directly from coalescent simulations.
Asm4pg is an automatic and reproducible genome assembly workflow for PacBio HiFi reads.
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