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jamshed (Jamshed Khan) · GitHub

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  1. COMBINE-lab/cuttlefish COMBINE-lab/cuttlefish Public

    Building the compacted de Bruijn graph efficiently from references or reads.

    Rust 98 14

  2. splatlab/mantis splatlab/mantis Public

    Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index

    C++ 88 23

  3. CaPS-SA CaPS-SA Public

    Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays

    C++ 20 9

  4. kache-hash kache-hash Public

    Dynamic, concurrent, and cache-efficient hash table for streaming k-mer operations

    C++ 7 1

  5. Formal-Verification-of-Bubble-Sort Formal-Verification-of-Bubble-Sort Public

    Formal Verification of the Correctness of a Bubble Sort Implementation Using Coq

    Coq 3

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