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  1. PepMimic PepMimic Public

    Official repository for the paper "Peptide design through binding interface mimicry with PepMimic" accepted by Nature Biomedical Engineering

    Python 42 8

  2. UniMoMo UniMoMo Public

    Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)

    Python 98 15

  3. THUNLP-MT/dyMEAN THUNLP-MT/dyMEAN Public

    This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"

    Python 134 18

  4. THUNLP-MT/MEAN THUNLP-MT/MEAN Public

    This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.

    Python 110 17

  5. THUNLP-MT/PS-VAE THUNLP-MT/PS-VAE Public

    This repo contains the codes for our paper: Molecule Generation by Principal Subgraph Mining and Assembling.

    Python 44 8

  6. THUNLP-MT/PepGLAD THUNLP-MT/PepGLAD Public

    Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)

    Python 129 11

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