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ENH: support np.datenum64 in dates.py by jklymak · Pull Request #9779 · matplotlib/matplotlib · GitHub

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37 changes: 32 additions & 5 deletions lib/matplotlib/dates.py
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Original file line number Diff line number Diff line change
Expand Up @@ -243,6 +243,27 @@ def _to_ordinalf(dt):
_to_ordinalf_np_vectorized = np.vectorize(_to_ordinalf)


def _dt64_to_ordinalf(d):
"""
Convert `numpy.datetime64` or an ndarray of those types to Gregorian
date as UTC float. Roundoff is via float64 precision. Practically:
microseconds for dates between 290301 BC, 294241 AD, milliseconds for
larger dates (see `numpy.datetime64`). Nanoseconds aren't possible
because we do times compared to ``0001-01-01T00:00:00`` (plus one day).
"""

# the "extra" ensures that we at least allow the dynamic range out to
# seconds. That should get out to +/-2e11 years.
extra = d - d.astype('datetime64[s]')
extra = extra.astype('timedelta64[ns]')
t0 = np.datetime64('0001-01-01T00:00:00').astype('datetime64[s]')
dt = (d.astype('datetime64[s]') - t0).astype(np.float64)
dt += extra.astype(np.float64) / 1.0e9
dt = dt / SEC_PER_DAY + 1.0

return dt


def _from_ordinalf(x, tz=None):
"""
Convert Gregorian float of the date, preserving hours, minutes,
Expand Down Expand Up @@ -354,12 +375,13 @@ def date2num(d):

Parameters
----------
d : :class:`datetime` or sequence of :class:`datetime`
d : :class:`datetime` or :class:`numpy.datetime64`, or sequences of
these classes.

Returns
-------
float or sequence of floats
Number of days (fraction part represents hours, minutes, seconds)
Number of days (fraction part represents hours, minutes, seconds, ms)
since 0001-01-01 00:00:00 UTC, plus one.

Notes
Expand All @@ -368,6 +390,10 @@ def date2num(d):
Gregorian calendar is assumed; this is not universal practice.
For details see the module docstring.
"""

if ((isinstance(d, np.ndarray) and np.issubdtype(d.dtype, np.datetime64))
or isinstance(d, np.datetime64)):
return _dt64_to_ordinalf(d)
if not cbook.iterable(d):
return _to_ordinalf(d)
else:
Expand Down Expand Up @@ -488,8 +514,8 @@ def drange(dstart, dend, delta):
*dend* are :class:`datetime` instances. *delta* is a
:class:`datetime.timedelta` instance.
"""
f1 = _to_ordinalf(dstart)
f2 = _to_ordinalf(dend)
f1 = date2num(dstart)
f2 = date2num(dend)
step = delta.total_seconds() / SEC_PER_DAY

# calculate the difference between dend and dstart in times of delta
Expand All @@ -504,7 +530,7 @@ def drange(dstart, dend, delta):
dinterval_end -= delta
num -= 1

f2 = _to_ordinalf(dinterval_end) # new float-endpoint
f2 = date2num(dinterval_end) # new float-endpoint
return np.linspace(f1, f2, num + 1)

### date tickers and formatters ###
Expand Down Expand Up @@ -1630,5 +1656,6 @@ def default_units(x, axis):
return None


units.registry[np.datetime64] = DateConverter()
units.registry[datetime.date] = DateConverter()
units.registry[datetime.datetime] = DateConverter()
46 changes: 42 additions & 4 deletions lib/matplotlib/tests/test_dates.py
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Original file line number Diff line number Diff line change
Expand Up @@ -3,13 +3,14 @@

from six.moves import map

import datetime
import warnings
import tempfile
import pytest

import datetime
import dateutil
import numpy as np
import pytest
import pytz
import tempfile
import warnings

try:
# mock in python 3.3+
Expand All @@ -22,6 +23,43 @@
import matplotlib.dates as mdates


def test_date_numpyx():

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

any reason this isn't done with base/time/timenp being pytest fixtures and the test parameterized or split into two?

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

Because I can understand this, and I have no idea what a pytest fixture is. Is there an advantage to doing something more obscure than a simple assert?

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

Only cause you're repeating yourself a lot so it's hard to tell what the specific tests are. Factoring out common features into a fixture means you can make two tests that are uniquely named for the things they're testing.

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

I'll look into it. OTOH, I find some of the tests aren't very easy to follow. Sometime verbosity is a good thing!

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

OK, happy to take suggestions, but I find the uses of fixtures in the existing tests makes for pretty obfuscated code.

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

shrugs can agree on that somewhat, either way it's not something I'd hold the PR up on.

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Well, I didn't mean to say I wasn't willing to learn, just that I don't get it... More than happy if you wanted to push a change or give me some pseudo code to get it to work... Thanks!

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Choose a reason Spam Abuse Off Topic Outdated Duplicate Resolved Low Quality

Sorry for missing your reply (the embedded ones seem to not pop up as notifications), and will totally try to remember your suggestion for the future. I should have been way clearer on what I wanted and given you an example. :/

# test that numpy dates work properly...
base = datetime.datetime(2017, 1, 1)
time = [base + datetime.timedelta(days=x) for x in range(0, 3)]
timenp = np.array(time, dtype='datetime64[ns]')
data = np.array([0., 2., 1.])
fig = plt.figure(figsize=(10, 2))
ax = fig.add_subplot(1, 1, 1)
h, = ax.plot(time, data)
hnp, = ax.plot(timenp, data)
assert np.array_equal(h.get_xdata(orig=False), hnp.get_xdata(orig=False))
fig = plt.figure(figsize=(10, 2))
ax = fig.add_subplot(1, 1, 1)
h, = ax.plot(data, time)
hnp, = ax.plot(data, timenp)
assert np.array_equal(h.get_ydata(orig=False), hnp.get_ydata(orig=False))


@pytest.mark.parametrize('t0', [datetime.datetime(2017, 1, 1, 0, 1, 1),

[datetime.datetime(2017, 1, 1, 0, 1, 1),
datetime.datetime(2017, 1, 1, 1, 1, 1)],

[[datetime.datetime(2017, 1, 1, 0, 1, 1),
datetime.datetime(2017, 1, 1, 1, 1, 1)],
[datetime.datetime(2017, 1, 1, 2, 1, 1),
datetime.datetime(2017, 1, 1, 3, 1, 1)]]])
@pytest.mark.parametrize('dtype', ['datetime64[s]',
'datetime64[us]',
'datetime64[ms]'])
def test_date_date2num_numpy(t0, dtype):
time = mdates.date2num(t0)
tnp = np.array(t0, dtype=dtype)
nptime = mdates.date2num(tnp)
assert np.array_equal(time, nptime)


@image_comparison(baseline_images=['date_empty'], extensions=['png'])
def test_date_empty():
# make sure mpl does the right thing when told to plot dates even
Expand Down

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