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EMnEM is a DNA motif finder that takes multiple alignments and a phylogenetic tree and identifies conserved patterns
MONKEY is a set of programs designed to search alignments of non-coding DNA sequence for matches to matrices representing the sequence specificity of transcription factors
C++
FAIDR-Fit: Explore the molecular features and function of intrinsically disordered regions (IDRs) across the human proteome in your browser
MONKEY is a set of programs designed to search alignments of non-coding DNA sequence for matches to matrices representing the sequence specificity of transcription factors
EMnEM is a DNA motif finder that takes multiple alignments and a phylogenetic tree and identifies conserved patterns
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