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30 packages
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base_pythonPublished Jun 13, 2023 by Open Problems in Single-Cell Analysis in openproblems-bio/base_images89.7k
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base_rPublished Jun 13, 2023 by Open Problems in Single-Cell Analysis in openproblems-bio/base_images24.9k
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utils/extract_uns_metadataPublished Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/openproblems21k
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h5ad/extract_uns_metadataPublished Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/core8.41k
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data_processors/precompute_clustering_runPublished Jan 10, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration5.5k
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metrics/isolated_label_f1Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.54k
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metrics/clustering_overlapPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.49k
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data_processors/transformPublished Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.45k
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metrics/regression_2Published Aug 1, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference3.29k
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metrics/graph_connectivityPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.19k
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metrics/lisiPublished Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.17k
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metrics/isolated_label_aswPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.17k
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metrics/cell_cycle_conservationPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.15k
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metrics/asw_labelPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.15k
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metrics/pcrPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.12k
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metrics/kbetPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.11k
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metrics/asw_batchPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration3.08k
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metrics/similarityPublished Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing2.72k
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metrics/regression_1Published Jul 19, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference2.58k
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metrics/ws_distancePublished Jan 22, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference2.36k
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metrics/f1Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection1.77k
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data_processors/precompute_clustering_mergePublished Jan 10, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration1.72k
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metrics/accuracyPublished Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection1.69k
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methods_count_aggregation/basic_count_aggregationPublished Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing1.51k
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methods_qc_filter/basic_qc_filterPublished Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing1.43k
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metrics/hvg_overlapPublished Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration1.42k
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methods_calculate_cell_volume/alpha_shapesPublished Sep 23, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_ist_preprocessing1.4k
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schema/verify_data_structurePublished Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/core1.38k
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metrics/semPublished Sep 17, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_grn_inference1.36k
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process_datasets/generate_sim_spatialclusterPublished Aug 28, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators1.31k