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QuPath · GitHub

QuPath

Open source software for bioimage analysis

Hi there 👋

QuPath is open-source software for bioimage analysis.

Here are some links to get started:

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  1. qupath qupath Public

    QuPath - Open-source bioimage analysis for research

    Java 1.4k 359

  2. qupath-docs qupath-docs Public

    QuPath documentation

    Python 23 27

  3. qupath-extension-djl qupath-extension-djl Public

    A QuPath extension for working with Deep Java Library (https://djl.ai)

    Java 10 7

  4. qupath-extension-instanseg qupath-extension-instanseg Public

    The official QuPath extension for InstanSeg

    Java 29 5

  5. qupath-extension-omero qupath-extension-omero Public

    QuPath extension to work with images through OMERO's APIs

    Java 9 3

  6. qupath-extension-template qupath-extension-template Public template

    Template to help create a new QuPath extension

    Java 21 16

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