satijalab

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seurat seurat Public

R toolkit for single cell genomics

R 2.8k 999
azimuth azimuth Public

A Shiny web app for mapping datasets using Seurat v4

HTML 151 45
seurat-wrappers seurat-wrappers Public

Community-provided extensions to Seurat

R 372 146
seurat-data seurat-data Public

Dataset distribution for Seurat

R 161 46

Type Language Sort

seurat Public
R toolkit for single cell genomics

satijalab/seurat's past year of commit activity

R 2,804 999 181 39 Updated Oct 5, 2026
seurat-docker Public
Docker images of Seurat

satijalab/seurat-docker's past year of commit activity

Dockerfile 9 9 0 0 Updated Sep 17, 2026
scSLIDE Public

satijalab/scSLIDE's past year of commit activity

R 13 0 3 0 Updated Aug 14, 2026
AzimuthAPI Public
R interface to the Pan-human Azimuth neural network for cell type annotation

satijalab/AzimuthAPI's past year of commit activity

R 15 MIT 2 6 0 Updated Jul 29, 2026
panhumanpy Public

satijalab/panhumanpy's past year of commit activity

Python 33 MIT 3 6 5 Updated Jul 27, 2026
seurat-object Public

satijalab/seurat-object's past year of commit activity

R 35 35 43 10 Updated Jul 17, 2026
pha-training-data Public
Code for preparing the Pan-human Azimuth training data

satijalab/pha-training-data's past year of commit activity

Jupyter Notebook 2 0 0 0 Updated Jul 16, 2026
seurat-wrappers Public
Community-provided extensions to Seurat

satijalab/seurat-wrappers's past year of commit activity

R 372 GPL-3.0 146 90 21 Updated Jun 29, 2026
azimuth Public
A Shiny web app for mapping datasets using Seurat v4

satijalab/azimuth's past year of commit activity

HTML 151 GPL-3.0 45 101 5 Updated May 22, 2026
azimuth_website Public

satijalab/azimuth_website's past year of commit activity

HTML 1 0 0 1 Updated Apr 28, 2026