py-uxarray: add 2025.5.x and fix dependencies - #50351
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tgamblin merged 29 commits intoJun 5, 2025
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tgamblin merged 29 commits into
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Hi @Chrismarsh! I noticed that the following package(s) don't yet have maintainers:
Are you interested in adopting any of these package(s)? If so, simply add the following to the package class: maintainers("Chrismarsh")If not, could you contact the developers of this package and see if they are interested? You can quickly see who has worked on a package with spack blame: $ spack blame py-holoviewsThank you for your help! Please don't add maintainers without their consent. You don't have to be a Spack expert or package developer in order to be a "maintainer," it just gives us a list of users willing to review PRs or debug issues relating to this package. A package can have multiple maintainers; just add a list of GitHub handles of anyone who wants to volunteer. |
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@cmarsh This doesn't concretize for me: $ git clone -b package-fix/py-uxarray https://github.com/Chrismarsh/spack spack-cmarsh-py-uxarray
Cloning into 'spack-cmarsh-py-uxarray'...
remote: Enumerating objects: 629868, done.
remote: Counting objects: 100% (318/318), done.
remote: Compressing objects: 100% (193/193), done.
remote: Total 629868 (delta 239), reused 137 (delta 116), pack-reused 629550 (from 3)
Receiving objects: 100% (629868/629868), 215.12 MiB | 3.87 MiB/s, done.
Resolving deltas: 100% (297930/297930), done.
Updating files: 100% (12267/12267), done.
$ cd spack-cmarsh-py-uxarray
$ source share/spack/setup-env.sh
$ spack env create py-uxarray-gcc-test
==> Created environment py-uxarray-gcc-test in: /home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test
==> Activate with: spack env activate py-uxarray-gcc-test
$ spack env activate -p py-uxarray-gcc-test
$ spack config edit
# added "py-uxarray" to empty list of specs
$ spack external find
==> The following specs have been detected on this system and added to /home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/spack.yaml
autoconf@2.69 binutils@2.35.2 cmake@3.26.5 curl@7.76.1 findutils@4.8.0 gettext@0.21 git-lfs@3.4.1 groff@1.22.4 openssh@8.7p1 perl@5.32.1 python@3.9.21 tar@1.34
automake@1.16.2 bison@3.7.4 coreutils@8.32 diffutils@3.7 gawk@5.1.0 git@2.43.5 gmake@4.3 m4@1.4.19 openssl@3.2.2 pkgconf@1.7.3 sed@4.8 zlib@1.2.11
$ spack compiler find
==> Added 1 new compiler to /home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/spack.yaml
gcc@11.5.0
==> Compilers are defined in the following files:
/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/spack.yaml
$ spack concretize --force --fresh 2>&1 | tee log.concretize.py-uxarray-gcc-test.001
==> Error: failed to concretize `py-uxarray` for the following reasons:
1. Cannot satisfy 'py-dask@2024.7.1:'
required because py-uxarray depends on py-dask@2024.7.1:+dataframe
required because py-uxarray requested explicitly
2. Cannot satisfy 'py-dask@2024.7.1:'
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@climbfuji That version of py-xarray exists in spack but afaik it is really hiding a more complex issue. This PR needs #50075 because #50075 fixes all the incorrect py-numpy range constraints and py-versioneer issues. It also enables py-xarray to concretize against py-numpy@2 which is needed for the py-numba which py-uxarray depends on. Strictly speaking this PR doesn't need #50352, but #50352 ensures py-uxarray works at run time as it will concretize with the wrong py-numpy@2, install, then fail on import. Can you please try with the dependency PR pulled too? |
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Chrismarsh
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May 7, 2025 22:25
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Thanks. AFter pulling in 50075, it concretizes, and it is now running the install. We'll know tomorrow if it succeeded. |
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@climbfuji Great thanks! I just added a new py-bokeh version and fixed a version error of it in py-panel that the CI caught. I don't think it would impact your build but just FYI |
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@Chrismarsh For whatever reason, the concretizer preferres numpy@1.25.2 and that version doesn't build with gcc (similar as reported in numpy/numpy#24431). If I "require" py-numpy@1.26, the build progresses until it errors out in py-pyogrio with this error: File "/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-pip-25.0.1-c7uhykutinahb72en7ot37nhguw5ciel/lib/python3.11/site-packages/pip/_internal/utils/misc.py", line 723, in prepare_metadata_for_build_wheel
return super().prepare_metadata_for_build_wheel(
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-pip-25.0.1-c7uhykutinahb72en7ot37nhguw5ciel/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_impl.py", line 224, in prepare_metadata_for_build_wheel
return self._call_hook(
^^^^^^^^^^^^^^^^
File "/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-pip-25.0.1-c7uhykutinahb72en7ot37nhguw5ciel/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_impl.py", line 402, in _call_hook
raise BackendUnavailable(
pip._vendor.pyproject_hooks._impl.BackendUnavailable: Cannot import 'setuptools.build_meta'
Removed file:///tmp/dom/spack-stage/spack-stage-py-pyogrio-0.10.0-zvuv6x44wet2ss6cd3etshbqipjusjmt/spack-src from build tracker '/tmp/pip-build-tracker-1m4vfmbi'
Removed build tracker: '/tmp/pip-build-tracker-1m4vfmbi'
==> Error: ProcessError: Command exited with status 2:
'/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-venv-1.0-k2v2arqpmu5gvt6mji4hdhxojr5eyxxu/bin/python3' '-m' 'pip' '-vvv' '--no-input' '--no-cache-dir' '--disable-pip-version-check' 'install' '--no-deps' '--ignore-installed' '--no-build-isolation' '--no-warn-script-location' '--no-index' '--prefix=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-pyogrio-0.10.0-zvuv6x44wet2ss6cd3etshbqipjusjmt' '.'
See build log for details:
/tmp/dom/spack-stage/spack-stage-py-pyogrio-0.10.0-zvuv6x44wet2ss6cd3etshbqipjusjmt/spack-build-out.txt
I think we should consider a conflict for py-numpy@1.25.* with gcc@:11 at the least, and then the missing dependency on setuptools.build_meta (wrong version?) needs to be fixed. |
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May 8, 2025
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@climbfuji numpy/numpy#21536 I have also added the missing setuptools. |
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climbfuji
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May 8, 2025
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Thanks. I was able to build it, but I can't import the uxarray module because of the following error. Is this because I also need to other PR #50352? It looks different, though (dask-expr missing). [py-uxarray-gcc-test] [dom@bounty spack-cmarsh-py-uxarray]$ python3
Python 3.11.11 (main, May 7 2025, 20:31:17) [GCC 11.5.0 20240719 (Red Hat 11.5.0-5)] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import uxarray
/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/dask/dataframe/__init__.py:42: FutureWarning:
Dask dataframe query planning is disabled because dask-expr is not installed.
You can install it with `pip install dask[dataframe]` or `conda install dask`.
This will raise in a future version.
warnings.warn(msg, FutureWarning)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/__init__.py", line 3, in <module>
from .core.api import concat, open_dataset, open_grid, open_mfdataset
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/core/__init__.py", line 1, in <module>
from .api import open_dataset, open_grid, open_mfdataset
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/core/api.py", line 10, in <module>
from uxarray.core.dataset import UxDataset
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/core/dataset.py", line 16, in <module>
from uxarray.core.dataarray import UxDataArray
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/core/dataarray.py", line 16, in <module>
from uxarray.core.aggregation import _uxda_grid_aggregate
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/core/aggregation.py", line 5, in <module>
from uxarray.grid.connectivity import get_face_node_partitions
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/grid/__init__.py", line 1, in <module>
from .grid import Grid
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/grid/grid.py", line 71, in <module>
from uxarray.grid.validation import (
File "/home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view/lib/python3.11/site-packages/uxarray/grid/validation.py", line 4, in <module>
import polars as pl
ModuleNotFoundError: No module named 'polars'
>>>
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Because the list of depends was in a different order than the pyproject.toml I missed that py-polars was a required dependency. This is simple addition is turning into a huge pain because of polars seemingly requiring features that only exist in nightly rust. |
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This now has all the missing dependencies and an updated py-polars. I don't love that it had to depend on rust@nightly which is a bit of a pain to install. This may need further patches to fix argminmax if 0.6.3 doesn't fix it -- testing now. |
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Chrismarsh
marked this pull request as draft
May 9, 2025 22:16
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Depending on rust@nightly is an absolute showstopper. We will not use uxarray until this is fixed. |
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Did @0.20 work with non-nightly rust? 2025 certainly doesn't -- it does not compile with a non-nightly rust. polars seems to be pretty clear in that it doesn't work with non-nightly rust
We = ? |
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we = spack-stack developers and users (most of NOAA EPIC/UFS, Navy, JCSDA, ...) |
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Caveat: I don't do rust work and have no idea about rust. I noticed the non-nightly rust compiler identifies itself as a nightly rustc --version rustc 1.85.0-nightly (4d91de4e4 2025-02-17) (built from a source tarball) which seems to trigger the nightly code paths. Maybe fixing that will let this work with a stable rust |
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I wish rust and cargo had never been introduced in the Python world. Sigh. |
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Indeed there is a problem with the stable rusts -- they have a -nightly suffix in the version which triggers code paths reserved for nightly compilers. This PR now depends on the rust changes in #50415 which fixes this. With the rust fix and the update to this PR, py-uxarray now builds with a stable rust. It does so by removing the nightly features of the dependent crates. py-polars proper seems to protect all its nightly code paths. |
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I am confirming this approach here |
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@Chrismarsh With the latest updates, my build fails in arrow: ==> Installing arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l [164/181]
==> Using cached archive: /home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/cache/_source-cache/archive/4c/4c898504958841cc86b6f8710ecb2919f96b5e10fa8989ac10ac4fca8362d86a.tar.gz
==> Ran patch() for arrow
==> arrow: Executing phase: 'cmake'
==> [2025-05-12-09:58:06.275393] '/usr/bin/cmake' '-G' 'Unix Makefiles' '-DCMAKE_INSTALL_PREFIX:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l' '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=ON' '-DCMAKE_INSTALL_RPATH:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/lib;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/lib64' '-DCMAKE_PREFIX_PATH:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/boost-1.88.0-vmehpzk2kn45lkifdl4runceusuri6e2;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/compiler-wrapper-1.0-rju4hpidmie22xib6suig4njsrueqhzm;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/flatbuffers-24.12.23-y4qtlp4ripzxdsng2jsa6duidwvktzx3;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/ninja-1.12.1-nheyepstt3pabkjmhi6gblt6qbteplsp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-numpy-1.26.4-t2pq336t3bhiy62aoyd6tutwes35cm2i;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/rapidjson-1.2.0-2024-08-16-xatyicox255eu4emjkjwbxapspemxo6m;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/re2-2024-07-02-722dbi4zxtppunp7m2xkvkmbw43zn4yf;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/snappy-1.2.1-e4ger3mj5taq5glnprnjaew6fghvwxys;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/thrift-0.21.0-v7zoq4p3hrxawhzidqnfjg5n3i34dze4;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/utf8proc-2.10.0-57yfej74zlmaz4x5lxpvdrxrbqug5uvq;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/xsimd-13.1.0-ksx2cvrlvolr4zswpeirwrhualwrhy66;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/openblas-0.3.29-bnyubsapxttpgaklvkyaadkkwvxggbh6;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/abseil-cpp-20240722.0-ytabpob6kq3nfspwr2qlvhynn5ygkjcj;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/bzip2-1.0.8-jeswqwurwk2ta4cjgmqpvtul62ph42kp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/expat-2.7.1-rew5ghq5hzuqvqmr5e5oyomuukbd7a7b;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/gdbm-1.25-vz6oxbket6ldbzzg3i5nqn3piesblqve;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libffi-3.4.7-7shuqbwyvqh2c2ha6dzephbxcx2bg3jm;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libxcrypt-4.4.38-rbh2nnbjxzxkxyoid3fiqnkvpqg7nkpb;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/openssl-3.4.1-g3ndk7ubsxayfykhlck6pv3duxm5z3dr;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/sqlite-3.46.0-ugxp7n7gyh2mt55thoky7wcnqng72pjj;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/util-linux-uuid-2.41-tdmsub2bxd3z3y4a2psigtkmsp2voznn;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/xz-5.6.3-w6ryjrco2ahwvsl5sybugqfn3bzhcbyg;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libbsd-0.12.2-czlgqucj56gc3jjupyfaph5hz2ub6vry;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/readline-8.2-hz4vztoszftxhoj5kejrd3yrhxe3nhv6;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/zlib-ng-2.2.4-g3fp4k6b6tsmczm5y3xpebb5i7bg2r6t;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libmd-1.1.0-4ffl7hz2dpczf7deadaiduozv3rozbjr;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/ncurses-6.5-45c43glvkcy6rhtanzfnrkrrsgdtcoce;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/gcc-runtime-11.5.0-kuplopobcy6uil3deqqg7c67apirawsi' '-DCMAKE_BUILD_TYPE:STRING=Release' '-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON' '-DCMAKE_INTERPROCEDURAL_OPTIMIZATION:BOOL=OFF' '-DCMAKE_POLICY_DEFAULT_CMP0090:STRING=NEW' '-DCMAKE_FIND_USE_PACKAGE_REGISTRY:BOOL=OFF' '-DCMAKE_EXPORT_COMPILE_COMMANDS:BOOL=ON' '-DPYTHON_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DPython_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DPython3_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DARROW_DEPENDENCY_SOURCE=SYSTEM' '-DARROW_NO_DEPRECATED_API=ON' '-DBUILD_SHARED:STRING=ON' '-DARROW_COMPUTE:BOOL=OFF' '-DARROW_CUDA:BOOL=OFF' '-DARROW_DATASET:BOOL=ON' '-DARROW_GANDIVA:BOOL=OFF' '-DARROW_GLOG:BOOL=OFF' '-DARROW_HDFS:BOOL=OFF' '-DARROW_IPC:BOOL=ON' '-DARROW_JEMALLOC:BOOL=OFF' '-DARROW_ORC:BOOL=OFF' '-DARROW_PARQUET:BOOL=ON' '-DARROW_PYTHON:BOOL=ON' '-DARROW_TENSORFLOW:BOOL=OFF' '-DARROW_WITH_BROTLI:BOOL=OFF' '-DARROW_WITH_BZ2:BOOL=OFF' '-DARROW_WITH_LZ4:BOOL=OFF' '-DARROW_WITH_SNAPPY:BOOL=OFF' '-DARROW_WITH_ZLIB:BOOL=OFF' '-DARROW_WITH_ZSTD:BOOL=OFF' '/tmp/dom/spack-stage/spack-stage-arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/spack-src/cpp'
-- Building using CMake version: 3.26.5
-- The C compiler identification is GNU 11.5.0
-- The CXX compiler identification is GNU 11.5.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/compiler-wrapper-1.0-rju4hpidmie22xib6suig4njsrueqhzm/libexec/spack/gcc/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/compiler-wrapper-1.0-rju4hpidmie22xib6suig4njsrueqhzm/libexec/spack/gcc/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 19.0.1 (full: '19.0.1')
-- Arrow SO version: 1900 (full: 1900.1.0)
-- clang-tidy 14 not found
-- clang-format 14 not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
-- Found Python3: /home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3 (found version "3.11.11") found components: Interpreter
fatal: not a git repository (or any of the parent directories): .git
-- Found cpplint executable at /tmp/dom/spack-stage/spack-stage-arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/spack-src/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Success
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Success
-- Arrow build warning level: PRODUCTION
-- Using ld linker
-- Build Type: RELEASE
-- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT
-- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT - Success
-- Using SYSTEM approach to find dependencies
-- ARROW_ABSL_BUILD_VERSION: 20211102.0
-- ARROW_ABSL_BUILD_SHA256_CHECKSUM: dcf71b9cba8dc0ca9940c4b316a0c796be8fab42b070bb6b7cab62b48f0e66c4
-- ARROW_AWS_C_AUTH_BUILD_VERSION: v0.6.22
-- ARROW_AWS_C_AUTH_BUILD_SHA256_CHECKSUM: 691a6b4418afcd3dc141351b6ad33fccd8e3ff84df0e9e045b42295d284ee14c
-- ARROW_AWS_C_CAL_BUILD_VERSION: v0.5.20
-- ARROW_AWS_C_CAL_BUILD_SHA256_CHECKSUM: acc352359bd06f8597415c366cf4ec4f00d0b0da92d637039a73323dd55b6cd0
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.8.9
-- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 2f3fbaf7c38eae5a00e2a816d09b81177f93529ae8ba1b82dc8f31407565327a
-- ARROW_AWS_C_COMPRESSION_BUILD_VERSION: v0.2.16
-- ARROW_AWS_C_COMPRESSION_BUILD_SHA256_CHECKSUM: 044b1dbbca431a07bde8255ef9ec443c300fc60d4c9408d4b862f65e496687f4
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.2.18
-- ARROW_AWS_C_EVENT_STREAM_BUILD_SHA256_CHECKSUM: 310ca617f713bf664e4c7485a3d42c1fb57813abd0107e49790d107def7cde4f
-- ARROW_AWS_C_HTTP_BUILD_VERSION: v0.7.3
-- ARROW_AWS_C_HTTP_BUILD_SHA256_CHECKSUM: 07e16c6bf5eba6f0dea96b6f55eae312a7c95b736f4d2e4a210000f45d8265ae
-- ARROW_AWS_C_IO_BUILD_VERSION: v0.13.14
-- ARROW_AWS_C_IO_BUILD_SHA256_CHECKSUM: 12b66510c3d9a4f7e9b714e9cfab2a5bf835f8b9ce2f909d20ae2a2128608c71
-- ARROW_AWS_C_MQTT_BUILD_VERSION: v0.8.4
-- ARROW_AWS_C_MQTT_BUILD_SHA256_CHECKSUM: 232eeac63e72883d460c686a09b98cdd811d24579affac47c5c3f696f956773f
-- ARROW_AWS_C_S3_BUILD_VERSION: v0.2.3
-- ARROW_AWS_C_S3_BUILD_SHA256_CHECKSUM: a00b3c9f319cd1c9aa2c3fa15098864df94b066dcba0deaccbb3caa952d902fe
-- ARROW_AWS_C_SDKUTILS_BUILD_VERSION: v0.1.6
-- ARROW_AWS_C_SDKUTILS_BUILD_SHA256_CHECKSUM: 8a2951344b2fb541eab1e9ca17c18a7fcbfd2aaff4cdd31d362d1fad96111b91
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.13
-- ARROW_AWS_CHECKSUMS_BUILD_SHA256_CHECKSUM: 0f897686f1963253c5069a0e495b85c31635ba146cd3ac38cc2ea31eaf54694d
-- ARROW_AWS_CRT_CPP_BUILD_VERSION: v0.18.16
-- ARROW_AWS_CRT_CPP_BUILD_SHA256_CHECKSUM: 9e69bc1dc4b50871d1038aa9ff6ddeb4c9b28f7d6b5e5b1b69041ccf50a13483
-- ARROW_AWS_LC_BUILD_VERSION: v1.3.0
-- ARROW_AWS_LC_BUILD_SHA256_CHECKSUM: ae96a3567161552744fc0cae8b4d68ed88b1ec0f3d3c98700070115356da5a37
-- ARROW_AWSSDK_BUILD_VERSION: 1.10.55
-- ARROW_AWSSDK_BUILD_SHA256_CHECKSUM: 2d552fb1a84bef4a9b65e34aa7031851ed2aef5319e02cc6e4cb735c48aa30de
-- ARROW_AZURE_SDK_BUILD_VERSION: azure-identity_1.9.0
-- ARROW_AZURE_SDK_BUILD_SHA256_CHECKSUM: 97065bfc971ac8df450853ce805f820f52b59457bd7556510186a1569502e4a1
-- ARROW_BOOST_BUILD_VERSION: 1.81.0
-- ARROW_BOOST_BUILD_SHA256_CHECKSUM: 9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574
-- ARROW_BROTLI_BUILD_VERSION: v1.0.9
-- ARROW_BROTLI_BUILD_SHA256_CHECKSUM: f9e8d81d0405ba66d181529af42a3354f838c939095ff99930da6aa9cdf6fe46
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_BZIP2_BUILD_SHA256_CHECKSUM: ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269
-- ARROW_CARES_BUILD_VERSION: 1.17.2
-- ARROW_CARES_BUILD_SHA256_CHECKSUM: 4803c844ce20ce510ef0eb83f8ea41fa24ecaae9d280c468c582d2bb25b3913d
-- ARROW_CRC32C_BUILD_VERSION: 1.1.2
-- ARROW_CRC32C_BUILD_SHA256_CHECKSUM: ac07840513072b7fcebda6e821068aa04889018f24e10e46181068fb214d7e56
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.8.3
-- ARROW_GBENCHMARK_BUILD_SHA256_CHECKSUM: 6bc180a57d23d4d9515519f92b0c83d61b05b5bab188961f36ac7b06b0d9e9ce
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GFLAGS_BUILD_SHA256_CHECKSUM: 34af2f15cf7367513b352bdcd2493ab14ce43692d2dcd9dfc499492966c64dcf
-- ARROW_GLOG_BUILD_VERSION: v0.5.0
-- ARROW_GLOG_BUILD_SHA256_CHECKSUM: eede71f28371bf39aa69b45de23b329d37214016e2055269b3b5e7cfd40b59f5
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_VERSION: v2.22.0
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_SHA256_CHECKSUM: 0c68782e57959c82e0c81def805c01460a042c1aae0c2feee905acaa2a2dc9bf
-- ARROW_GRPC_BUILD_VERSION: v1.46.3
-- ARROW_GRPC_BUILD_SHA256_CHECKSUM: d6cbf22cb5007af71b61c6be316a79397469c58c82a942552a62e708bce60964
-- ARROW_GTEST_BUILD_VERSION: 1.11.0
-- ARROW_GTEST_BUILD_SHA256_CHECKSUM: b4870bf121ff7795ba20d20bcdd8627b8e088f2d1dab299a031c1034eddc93d5
-- ARROW_JEMALLOC_BUILD_VERSION: 5.3.0
-- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 2db82d1e7119df3e71b7640219b6dfe84789bc0537983c3b7ac4f7189aecfeaa
-- ARROW_LZ4_BUILD_VERSION: v1.10.0
-- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 537512904744b35e232912055ccf8ec66d768639ff3abe5788d90d792ec5f48b
-- ARROW_MIMALLOC_BUILD_VERSION: v2.0.6
-- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: 9f05c94cc2b017ed13698834ac2a3567b6339a8bde27640df5a1581d49d05ce5
-- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.10.5
-- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 5daca6ca216495edf89d167f808d1d03c4a4d929cef7da5e10f135ae1540c7e4
-- ARROW_OPENTELEMETRY_BUILD_VERSION: v1.13.0
-- ARROW_OPENTELEMETRY_BUILD_SHA256_CHECKSUM: 7735cc56507149686e6019e06f588317099d4522480be5f38a2a09ec69af1706
-- ARROW_OPENTELEMETRY_PROTO_BUILD_VERSION: v0.17.0
-- ARROW_OPENTELEMETRY_PROTO_BUILD_SHA256_CHECKSUM: f269fbcb30e17b03caa1decd231ce826e59d7651c0f71c3b28eb5140b4bb5412
-- ARROW_ORC_BUILD_VERSION: 2.0.3
-- ARROW_ORC_BUILD_SHA256_CHECKSUM: 082cba862b5a8a0d14c225404d0b51cd8d1b64ca81b8f1e500322ce8922cb86d
-- ARROW_PROTOBUF_BUILD_VERSION: v21.3
-- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: 2f723218f6cb709ae4cdc4fb5ed56a5951fc5d466f0128ce4c946b8c78c8c49f
-- ARROW_RAPIDJSON_BUILD_VERSION: 232389d4f1012dddec4ef84861face2d2ba85709
-- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: b9290a9a6d444c8e049bd589ab804e0ccf2b05dc5984a19ed5ae75d090064806
-- ARROW_RE2_BUILD_VERSION: 2022-06-01
-- ARROW_RE2_BUILD_SHA256_CHECKSUM: f89c61410a072e5cbcf8c27e3a778da7d6fd2f2b5b1445cd4f4508bee946ab0f
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.10
-- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 49d831bffcc5f3d01482340fe5af59852ca2fe76c3e05df0e67203ebbe0f1d90
-- ARROW_SUBSTRAIT_BUILD_VERSION: v0.44.0
-- ARROW_SUBSTRAIT_BUILD_SHA256_CHECKSUM: f989a862f694e7dbb695925ddb7c4ce06aa6c51aca945105c075139aed7e55a2
-- ARROW_S2N_TLS_BUILD_VERSION: v1.3.35
-- ARROW_S2N_TLS_BUILD_SHA256_CHECKSUM: 9d32b26e6bfcc058d98248bf8fc231537e347395dd89cf62bb432b55c5da990d
-- ARROW_THRIFT_BUILD_VERSION: 0.20.0
-- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: b5d8311a779470e1502c027f428a1db542f5c051c8e1280ccd2163fa935ff2d6
-- ARROW_UCX_BUILD_VERSION: 1.12.1
-- ARROW_UCX_BUILD_SHA256_CHECKSUM: 9bef31aed0e28bf1973d28d74d9ac4f8926c43ca3b7010bd22a084e164e31b71
-- ARROW_UTF8PROC_BUILD_VERSION: v2.7.0
-- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 4bb121e297293c0fd55f08f83afab6d35d48f0af4ecc07523ad8ec99aa2b12a1
-- ARROW_XSIMD_BUILD_VERSION: 13.0.0
-- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: 8bdbbad0c3e7afa38d88d0d484d70a1671a1d8aefff03f4223ab2eb6a41110a3
-- ARROW_ZLIB_BUILD_VERSION: 1.3.1
-- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: 9a93b2b7dfdac77ceba5a558a580e74667dd6fede4585b91eefb60f03b72df23
-- ARROW_ZSTD_BUILD_VERSION: 1.5.6
-- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: 8c29e06cf42aacc1eafc4077ae2ec6c6fcb96a626157e0593d5e82a34fd403c1
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Looking for _M_ARM64
-- Looking for _M_ARM64 - not found
-- Looking for __SIZEOF_INT128__
-- Looking for __SIZEOF_INT128__ - found
-- Found Boost: /home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/boost-1.88.0-vmehpzk2kn45lkifdl4runceusuri6e2/lib/cmake/Boost-1.88.0/BoostConfig.cmake (found suitable version "1.88.0", minimum required is "1.58")
-- Boost include dir: /home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/boost-1.88.0-vmehpzk2kn45lkifdl4runceusuri6e2/include
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
CMake Warning at cmake_modules/FindThriftAlt.cmake:56 (find_package):
By not providing "FindThrift.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "Thrift", but
CMake did not find one.
Could not find a package configuration file provided by "Thrift" (requested
version 0.11.0) with any of the following names:
ThriftConfig.cmake
thrift-config.cmake
Add the installation prefix of "Thrift" to CMAKE_PREFIX_PATH or set
"Thrift_DIR" to a directory containing one of the above files. If "Thrift"
provides a separate development package or SDK, be sure it has been
installed.
Call Stack (most recent call first):
cmake_modules/ThirdpartyToolchain.cmake:313 (find_package)
cmake_modules/ThirdpartyToolchain.cmake:1837 (resolve_dependency)
CMakeLists.txt:546 (include)
-- Checking for module 'thrift'
INFODH DEBUG: _pkg_check_modules_pkg_op=''
INFODH DEBUG: _pkg_check_modules_pkg_name='thrift'
INFODH DEBUG: /usr/bin/pkg-config --print-errors;--short-errors;--exists;thrift
-- Package 'thrift', required by 'virtual:world', not found
CMake Error at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
Could NOT find ThriftAlt: (Required is at least version "0.11.0") (found
ThriftAlt_LIB-NOTFOUND)
Call Stack (most recent call first):
/usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:598 (_FPHSA_FAILURE_MESSAGE)
cmake_modules/FindThriftAlt.cmake:164 (find_package_handle_standard_args)
cmake_modules/ThirdpartyToolchain.cmake:313 (find_package)
cmake_modules/ThirdpartyToolchain.cmake:1837 (resolve_dependency)
CMakeLists.txt:546 (include)
-- Configuring incomplete, errors occurred!
==> Error: ProcessError: Command exited with status 1:
'/usr/bin/cmake' '-G' 'Unix Makefiles' '-DCMAKE_INSTALL_PREFIX:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l' '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=ON' '-DCMAKE_INSTALL_RPATH:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/lib;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/lib64' '-DCMAKE_PREFIX_PATH:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/boost-1.88.0-vmehpzk2kn45lkifdl4runceusuri6e2;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/compiler-wrapper-1.0-rju4hpidmie22xib6suig4njsrueqhzm;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/flatbuffers-24.12.23-y4qtlp4ripzxdsng2jsa6duidwvktzx3;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/ninja-1.12.1-nheyepstt3pabkjmhi6gblt6qbteplsp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-numpy-1.26.4-t2pq336t3bhiy62aoyd6tutwes35cm2i;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/rapidjson-1.2.0-2024-08-16-xatyicox255eu4emjkjwbxapspemxo6m;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/re2-2024-07-02-722dbi4zxtppunp7m2xkvkmbw43zn4yf;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/snappy-1.2.1-e4ger3mj5taq5glnprnjaew6fghvwxys;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/thrift-0.21.0-v7zoq4p3hrxawhzidqnfjg5n3i34dze4;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/utf8proc-2.10.0-57yfej74zlmaz4x5lxpvdrxrbqug5uvq;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/xsimd-13.1.0-ksx2cvrlvolr4zswpeirwrhualwrhy66;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/openblas-0.3.29-bnyubsapxttpgaklvkyaadkkwvxggbh6;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/abseil-cpp-20240722.0-ytabpob6kq3nfspwr2qlvhynn5ygkjcj;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/bzip2-1.0.8-jeswqwurwk2ta4cjgmqpvtul62ph42kp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/expat-2.7.1-rew5ghq5hzuqvqmr5e5oyomuukbd7a7b;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/gdbm-1.25-vz6oxbket6ldbzzg3i5nqn3piesblqve;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libffi-3.4.7-7shuqbwyvqh2c2ha6dzephbxcx2bg3jm;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libxcrypt-4.4.38-rbh2nnbjxzxkxyoid3fiqnkvpqg7nkpb;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/openssl-3.4.1-g3ndk7ubsxayfykhlck6pv3duxm5z3dr;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/sqlite-3.46.0-ugxp7n7gyh2mt55thoky7wcnqng72pjj;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/util-linux-uuid-2.41-tdmsub2bxd3z3y4a2psigtkmsp2voznn;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/xz-5.6.3-w6ryjrco2ahwvsl5sybugqfn3bzhcbyg;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libbsd-0.12.2-czlgqucj56gc3jjupyfaph5hz2ub6vry;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/readline-8.2-hz4vztoszftxhoj5kejrd3yrhxe3nhv6;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/zlib-ng-2.2.4-g3fp4k6b6tsmczm5y3xpebb5i7bg2r6t;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libmd-1.1.0-4ffl7hz2dpczf7deadaiduozv3rozbjr;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/ncurses-6.5-45c43glvkcy6rhtanzfnrkrrsgdtcoce;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/gcc-runtime-11.5.0-kuplopobcy6uil3deqqg7c67apirawsi' '-DCMAKE_BUILD_TYPE:STRING=Release' '-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON' '-DCMAKE_INTERPROCEDURAL_OPTIMIZATION:BOOL=OFF' '-DCMAKE_POLICY_DEFAULT_CMP0090:STRING=NEW' '-DCMAKE_FIND_USE_PACKAGE_REGISTRY:BOOL=OFF' '-DCMAKE_EXPORT_COMPILE_COMMANDS:BOOL=ON' '-DPYTHON_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DPython_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DPython3_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DARROW_DEPENDENCY_SOURCE=SYSTEM' '-DARROW_NO_DEPRECATED_API=ON' '-DBUILD_SHARED:STRING=ON' '-DARROW_COMPUTE:BOOL=OFF' '-DARROW_CUDA:BOOL=OFF' '-DARROW_DATASET:BOOL=ON' '-DARROW_GANDIVA:BOOL=OFF' '-DARROW_GLOG:BOOL=OFF' '-DARROW_HDFS:BOOL=OFF' '-DARROW_IPC:BOOL=ON' '-DARROW_JEMALLOC:BOOL=OFF' '-DARROW_ORC:BOOL=OFF' '-DARROW_PARQUET:BOOL=ON' '-DARROW_PYTHON:BOOL=ON' '-DARROW_TENSORFLOW:BOOL=OFF' '-DARROW_WITH_BROTLI:BOOL=OFF' '-DARROW_WITH_BZ2:BOOL=OFF' '-DARROW_WITH_LZ4:BOOL=OFF' '-DARROW_WITH_SNAPPY:BOOL=OFF' '-DARROW_WITH_ZLIB:BOOL=OFF' '-DARROW_WITH_ZSTD:BOOL=OFF' '/tmp/dom/spack-stage/spack-stage-arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/spack-src/cpp'
1 error found in build log:
160
161 -- Checking for module 'thrift'
162 INFODH DEBUG: _pkg_check_modules_pkg_op=''
163 INFODH DEBUG: _pkg_check_modules_pkg_name='thrift'
164 INFODH DEBUG: /usr/bin/pkg-config --print-errors;--short-errors;--exists;thrift
165 -- Package 'thrift', required by 'virtual:world', not found
>> 166 CMake Error at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
167 Could NOT find ThriftAlt: (Required is at least version "0.11.0") (found
168 ThriftAlt_LIB-NOTFOUND)
169 Call Stack (most recent call first):
170 /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:598 (_FPHSA_FAILURE_MESSAGE)
171 cmake_modules/FindThriftAlt.cmake:164 (find_package_handle_standard_args)
172 cmake_modules/ThirdpartyToolchain.cmake:313 (find_package)
See build log for details:
/tmp/dom/spack-stage/spack-stage-arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/spack-build-out.txt
==> Warning: Skipping build of py-dask-expr-1.1.9-5by5doqmz6dgkrsirns3copxjxfaksvz since arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l failed
==> Warning: Skipping build of py-dask-2024.7.1-bwiiewbt57nux4nl3agyxdu6kxji4ry7 since py-dask-expr-1.1.9-5by5doqmz6dgkrsirns3copxjxfaksvz failed
==> Warning: Skipping build of py-datashader-0.16.3-lzystqm36vc5owwecjbfrffb4po5v6q4 since py-dask-2024.7.1-bwiiewbt57nux4nl3agyxdu6kxji4ry7 failed
==> Warning: Skipping build of py-uxarray-2024.10.0-54v6wr6dpicuafy2nuqeawvmrx7f5zkf since py-datashader-0.16.3-lzystqm36vc5owwecjbfrffb4po5v6q4 failed
==> Warning: Skipping build of py-spatialpandas-0.4.10-77uxybtnxblbhx7vyaulf6bzzwckukqv since py-dask-2024.7.1-bwiiewbt57nux4nl3agyxdu6kxji4ry7 failed
==> Warning: Skipping build of py-pyarrow-19.0.1-jiov5mrfwzxnsktvyexiuy4dcbrboenr since arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l failed
==> Error: Terminating after first install failure: ProcessError: Command exited with status 1:
'/usr/bin/cmake' '-G' 'Unix Makefiles' '-DCMAKE_INSTALL_PREFIX:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l' '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=ON' '-DCMAKE_INSTALL_RPATH:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/lib;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/lib64' '-DCMAKE_PREFIX_PATH:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/boost-1.88.0-vmehpzk2kn45lkifdl4runceusuri6e2;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/compiler-wrapper-1.0-rju4hpidmie22xib6suig4njsrueqhzm;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/flatbuffers-24.12.23-y4qtlp4ripzxdsng2jsa6duidwvktzx3;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/ninja-1.12.1-nheyepstt3pabkjmhi6gblt6qbteplsp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/py-numpy-1.26.4-t2pq336t3bhiy62aoyd6tutwes35cm2i;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/rapidjson-1.2.0-2024-08-16-xatyicox255eu4emjkjwbxapspemxo6m;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/re2-2024-07-02-722dbi4zxtppunp7m2xkvkmbw43zn4yf;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/snappy-1.2.1-e4ger3mj5taq5glnprnjaew6fghvwxys;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/thrift-0.21.0-v7zoq4p3hrxawhzidqnfjg5n3i34dze4;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/utf8proc-2.10.0-57yfej74zlmaz4x5lxpvdrxrbqug5uvq;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/xsimd-13.1.0-ksx2cvrlvolr4zswpeirwrhualwrhy66;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/openblas-0.3.29-bnyubsapxttpgaklvkyaadkkwvxggbh6;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/abseil-cpp-20240722.0-ytabpob6kq3nfspwr2qlvhynn5ygkjcj;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/bzip2-1.0.8-jeswqwurwk2ta4cjgmqpvtul62ph42kp;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/expat-2.7.1-rew5ghq5hzuqvqmr5e5oyomuukbd7a7b;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/gdbm-1.25-vz6oxbket6ldbzzg3i5nqn3piesblqve;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libffi-3.4.7-7shuqbwyvqh2c2ha6dzephbxcx2bg3jm;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libxcrypt-4.4.38-rbh2nnbjxzxkxyoid3fiqnkvpqg7nkpb;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/openssl-3.4.1-g3ndk7ubsxayfykhlck6pv3duxm5z3dr;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/sqlite-3.46.0-ugxp7n7gyh2mt55thoky7wcnqng72pjj;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/util-linux-uuid-2.41-tdmsub2bxd3z3y4a2psigtkmsp2voznn;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/xz-5.6.3-w6ryjrco2ahwvsl5sybugqfn3bzhcbyg;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libbsd-0.12.2-czlgqucj56gc3jjupyfaph5hz2ub6vry;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/readline-8.2-hz4vztoszftxhoj5kejrd3yrhxe3nhv6;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/zlib-ng-2.2.4-g3fp4k6b6tsmczm5y3xpebb5i7bg2r6t;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/libmd-1.1.0-4ffl7hz2dpczf7deadaiduozv3rozbjr;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/ncurses-6.5-45c43glvkcy6rhtanzfnrkrrsgdtcoce;/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/gcc-runtime-11.5.0-kuplopobcy6uil3deqqg7c67apirawsi' '-DCMAKE_BUILD_TYPE:STRING=Release' '-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON' '-DCMAKE_INTERPROCEDURAL_OPTIMIZATION:BOOL=OFF' '-DCMAKE_POLICY_DEFAULT_CMP0090:STRING=NEW' '-DCMAKE_FIND_USE_PACKAGE_REGISTRY:BOOL=OFF' '-DCMAKE_EXPORT_COMPILE_COMMANDS:BOOL=ON' '-DPYTHON_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DPython_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DPython3_EXECUTABLE:STRING=/home/dom/scratch/spack-cmarsh-py-uxarray/opt/spack/linux-skylake/python-3.11.11-o5ze6cd5by6dicvpsetz4peh754hcmhp/bin/python3' '-DARROW_DEPENDENCY_SOURCE=SYSTEM' '-DARROW_NO_DEPRECATED_API=ON' '-DBUILD_SHARED:STRING=ON' '-DARROW_COMPUTE:BOOL=OFF' '-DARROW_CUDA:BOOL=OFF' '-DARROW_DATASET:BOOL=ON' '-DARROW_GANDIVA:BOOL=OFF' '-DARROW_GLOG:BOOL=OFF' '-DARROW_HDFS:BOOL=OFF' '-DARROW_IPC:BOOL=ON' '-DARROW_JEMALLOC:BOOL=OFF' '-DARROW_ORC:BOOL=OFF' '-DARROW_PARQUET:BOOL=ON' '-DARROW_PYTHON:BOOL=ON' '-DARROW_TENSORFLOW:BOOL=OFF' '-DARROW_WITH_BROTLI:BOOL=OFF' '-DARROW_WITH_BZ2:BOOL=OFF' '-DARROW_WITH_LZ4:BOOL=OFF' '-DARROW_WITH_SNAPPY:BOOL=OFF' '-DARROW_WITH_ZLIB:BOOL=OFF' '-DARROW_WITH_ZSTD:BOOL=OFF' '/tmp/dom/spack-stage/spack-stage-arrow-19.0.1-aazoeluj7vhxp4rgbckgae73qsksuy6l/spack-src/cpp'
==> Updating view at /home/dom/scratch/spack-cmarsh-py-uxarray/var/spack/environments/py-uxarray-gcc-test/.spack-env/view
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June 4, 2025 22:06
tgamblin
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Jun 5, 2025
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