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fastq-processing

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joshuaowalker / specimux

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High-performance dual barcode and primer demultiplexer for MinION sequenced reads, optimized for fungal DNA barcoding.

bioinformatics minion biodiversity oxford-nanopore demultiplexing sequence-analysis nanopore-sequencing dna-barcoding mycology fastq-processing
  • Updated Aug 12, 2026
  • Python

pentalpha / luthien

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Super ultra-fast fastq preprocessor, using parallel windowed adaptive trimming.

bioinformatics rna-seq parallel parallel-computing parallelism concurrent-programming rnaseq trimming fastq parallel-programming fastq-files bioinfo quality-score fastq-processing
  • Updated Oct 28, 2019
  • C++

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