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allow generate_nucleotides to only generate nucleotides for some mutation types?

Status: Open.

#436 In tskit-dev/pyslim;

· petrelharp opened on Aug 23, 2026

release tasks

Status: Open.

#391 In tskit-dev/pyslim;

· petrelharp opened on Aug 16, 2025

provide example of using individual parents

Status: Open.

#386 In tskit-dev/pyslim;

· petrelharp opened on Aug 12, 2025

Add a citation manual

Status: Open.

#377 In tskit-dev/pyslim;

· hossam26644 opened on Jul 14, 2025

add example of "add more mutations to SLiM sim"

Status: Open.

#373 In tskit-dev/pyslim;

· petrelharp opened on May 27, 2025

tools for multiple chromosome

Status: Open.

#361 In tskit-dev/pyslim;

· petrelharp opened on Feb 26, 2025

Potential to use .frequencies() method in /tutorial.html

Status: Open.

#336 In tskit-dev/pyslim;

· hyanwong opened on Nov 16, 2023

test on annotating tsinfer'ed tree sequence

Status: Open.

#317 In tskit-dev/pyslim;

· petrelharp opened on Jun 26, 2023

provide example of annotating existing mutations

Status: Open.

#316 In tskit-dev/pyslim;

· petrelharp opened on Jun 26, 2023

tsinfered tree sequences don't have 'type' key in top-level metdata but set_tree_sequence_metadata expects they do

Status: Open.

#315 In tskit-dev/pyslim;

· petrelharp opened on Jun 25, 2023

fixup XY annotation example

documentation

enhancementNew feature or requestNew feature or request

Status: Open.

#223 In tskit-dev/pyslim;

· petrelharp opened on Dec 15, 2021

·  

v1.0

test running .py files in SLiM recipes

tests

Status: Open.

#220 In tskit-dev/pyslim;

· petrelharp opened on Dec 13, 2021

·  

v1.1