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Building open, reusable, and sustainable scientific software — with researchers, for discovery.
The Scientific Software Engineering Center is part of the University of Washington eScience Institute. We pair professional software engineers with researchers across disciplines to embed software engineering best practices into scientific work, and to ship open-source tools that continue to serve the community long after our engagements end.
Founded in January 2022 through a Schmidt Sciences initiative, SSEC is one of a small number of centers nationally dedicated to growing scientific software engineering as a discipline.
We work across domains including astronomy, oceanography, seismology, genetics, ecology, biodiversity, bioethics, medicine, energy, education, and disaster response.
A curated slice of our active and recently archived work. See the full portfolio for everything else.
| Project | Domain | What it does |
|---|---|---|
| antenna | Ecology / Education | AI-powered insect camera-trap toolset for conservation research |
| bioethics | Bioethics / Medicine | Generates plain-language lay summaries of academic research for study participants |
| biodiversity-horizons | Ecology | Predicts biodiversity risks under climate change scenarios |
| HPyX | HPC / Software Engineering | Brings high-performance parallelism to Python |
| ovro-lwa-portal | Astronomy | Accessible data platform for the Owens Valley Long Wavelength Array |
| protein-design-pipelines | Genetics / Bioethics | Reproducible pipelines aligning model developers and protein designers |
| idd-database | Medicine | Centralized data portal for intellectual and developmental disability research |
| caustics | Astronomy | Gravitational lensing simulator for the ML era |
| phylo2vec | Genetics | Vector representation for binary phylogenetic trees |
| SafeMind | Mental Health / AI Safety | Safer GenAI for mental health via lived-experience–grounded simulation |
| llmaven | AI / NAIRR | NAIRR-backed AI gateway exploring LLM infrastructure for researchers |
| rse-plugins | Developer Tooling | Research software engineering plugins for coding agents |
All of our work is open by default. Before opening a PR, please read:
New contributors are welcome. Issues labeled good first issue on individual repositories are a great place to start.
SSEC is supported by Schmidt Sciences and hosted within the UW eScience Institute. We partner with research groups across UW and with collaborators internationally.
The resulting tools are open source and reusable, designed to sustain discovery beyond SSEC's involvement in the projects.
✨Special ✨ repository that used to add README.md for organization profile visible to anyone
An open-source AI control plane developed under NSF NAIRR award #240292 by UW SSEC under Schmidt Sciences Virtual Institutes for Scientific Software program.
Python project repository template for developing python package.
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