Virtual Cell

A Modeling and Simulation Environment for Cell Biology

20 followers
UConn Health, Farmington, Connecticut
http://vcell.org

Overview
Repositories
Projects
Packages
People

Pinned Loading

vcell vcell Public

Virtual Cell Framework

Java 136 34
vcell-fvsolver vcell-fvsolver Public

VCell Finite Volume PDE solver

C++ 2
vcell-solvers vcell-solvers Public

Virtual Cell solvers

C 7 6
vcell-fiji vcell-fiji Public

A tool that loads VCell simulation results into ImageJ and performs statistical analysis.

Java 2 1
pyvcell pyvcell Public

Python 2
libvcell libvcell Public

Java 1

Repositories

Type Language Sort

vcell Public
Virtual Cell Framework

virtualcell/vcell's past year of commit activity

Java 136 34 271 (3 issues need help) 34 Updated Aug 24, 2026
VCell-AI Public
An AI-powered platform for discovering, analyzing, and exploring biomodels from the VCell database. Built as part of Google Summer of Code (GSoC25), this project combines modern web technologies with AI capabilities to provide an intuitive interface for scientific model research.

virtualcell/VCell-AI's past year of commit activity

TypeScript 13 MIT 14 24 27 Updated Aug 24, 2026
vcell-chombo Public

virtualcell/vcell-chombo's past year of commit activity

C++ 0 MIT 0 0 0 Updated Aug 22, 2026
vcell-mbsolver Public
Moving boundary solver standalone, linkable library and python bindings.

virtualcell/vcell-mbsolver's past year of commit activity

C 1 MIT 0 1 0 Updated Aug 21, 2026
vcell-ode Public
The ODE focused solvers VCell utilizes in it's main applications

virtualcell/vcell-ode's past year of commit activity

C 1 0 4 1 Updated Aug 21, 2026
vcell-expressionparser Public
Virtual Cell Expression Parser submodule

virtualcell/vcell-expressionparser's past year of commit activity

C++ 0 MIT 0 0 0 Updated Aug 21, 2026
vcell-jhdf Public Forked from jamesmudd/jhdf
Temporary fork of jamesmudd/jhdf carrying incremental + streaming chunk writing (upstream: jhdf#654 / PR jhdf#865). VCell pins tag 0.13.0-VCELL-1. See VCELL-FORK.md.

virtualcell/vcell-jhdf's past year of commit activity

Java 0 MIT 48 0 0 Updated Aug 20, 2026
vcell-jsbml Public Forked from sbmlteam/jsbml
JSBML Fork For VCell

virtualcell/vcell-jsbml's past year of commit activity

Java 0 LGPL-2.1 27 0 0 Updated Aug 17, 2026
vcell-vtk-wasm Public
Custom VTK-compiled-to-WebAssembly bundle for VCell's browser field viewer (built from VTK source + marshalling-coverage patches)

virtualcell/vcell-vtk-wasm's past year of commit activity

Shell 0 0 0 0 Updated Aug 8, 2026
vcell-messaging Public
Repository for VCellMessaging submodule.

virtualcell/vcell-messaging's past year of commit activity

C++ 0 MIT 0 0 0 Updated Jul 31, 2026