FlyBase

A Database of Drosophila Genes & Genomes

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drosophila-anatomy-developmental-ontology drosophila-anatomy-developmental-ontology Public

The home of the Drosophila anatomy ontology

Jupyter Notebook 23 6
react-sequence-viewer react-sequence-viewer Public

A React wrapper around the BioJS sequence-viewer component

JavaScript 9 3
react-ontology-ribbon react-ontology-ribbon Public

A React component for generating a heatmap type display for GO slims.

JavaScript 7 4
bulkfile-scripts bulkfile-scripts Public

Scripts useful for working with bulk FlyBase data locally.

Perl 3 5
flybase-controlled-vocabulary flybase-controlled-vocabulary Public

The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

Shell 10 6
chado chado Public

Chado related code for FlyBase

PLpgSQL 1

Repositories

Type Language Sort

alliance-linkml-flybase Public
Code for export of FlyBase data to the Alliance LinkML-based persistent store.

FlyBase/alliance-linkml-flybase's past year of commit activity

Python 0 MIT 0 0 0 Updated Aug 20, 2026
harvdev-bulk-reports Public
Generate bulk reports for FlyBase curators, users and collaborators.

FlyBase/harvdev-bulk-reports's past year of commit activity

Perl 0 MIT 0 0 0 Updated Aug 19, 2026
harvdev-perl-proforma-parser Public
Perl proforma parsing code

FlyBase/harvdev-perl-proforma-parser's past year of commit activity

Perl 0 GPL-3.0 0 0 0 Updated Aug 17, 2026
knowledge-graph Public
Versioned, evidence-grounded FlyBase knowledge graph data product, schema, documentation, and examples.

FlyBase/knowledge-graph's past year of commit activity

0 MIT 0 0 0 Updated Aug 12, 2026
drosophila-anatomy-developmental-ontology Public
The home of the Drosophila anatomy ontology

FlyBase/drosophila-anatomy-developmental-ontology's past year of commit activity

Jupyter Notebook 23 CC-BY-4.0 6 15 0 Updated Aug 7, 2026
harvdev-peeves-parser Public
Stripped down peeves for testing ONLY. May be destroyed later. To run on tests to get idea of peeves messages.

FlyBase/harvdev-peeves-parser's past year of commit activity

Perl 0 0 0 0 Updated Jul 23, 2026
FB_flag_migration Public
scripts and data to handle FlyBase flag data into alliance

FlyBase/FB_flag_migration's past year of commit activity

Perl 0 0 0 0 Updated Jul 14, 2026
flybase-controlled-vocabulary Public
The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

FlyBase/flybase-controlled-vocabulary's past year of commit activity

Shell 10 CC-BY-4.0 6 0 0 Updated Jul 10, 2026
drosophila-phenotype-ontology Public
The home of the Drosophila phenotype ontology

FlyBase/drosophila-phenotype-ontology's past year of commit activity

Makefile 5 CC-BY-4.0 2 23 0 Updated Jul 10, 2026
drosophila-developmental-ontology Public
The home of the Drosophila developmental ontology, an ontology of Drosophila melanogaster developmental stages.

FlyBase/drosophila-developmental-ontology's past year of commit activity

Makefile 5 CC-BY-4.0 0 0 0 Updated Jul 9, 2026

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