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jbloom (Jesse Bloom) · GitHub

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  1. jbloomlab/SARS2-RBD-escape-calc jbloomlab/SARS2-RBD-escape-calc Public

    SARS-CoV-2 RBD antibody escape calculator

    Jupyter Notebook 13 3

  2. jbloomlab/polyclonal jbloomlab/polyclonal Public

    Model mutational escape from polyclonal antibodies.

    Jupyter Notebook 3

  3. jbloomlab/SARS2-mut-fitness jbloomlab/SARS2-mut-fitness Public

    Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates

    Jupyter Notebook 22 8

  4. jbloomlab/neutcurve jbloomlab/neutcurve Public

    Fit and plot neutralization curves

    Jupyter Notebook 9 4

  5. jbloomlab/dms_variants jbloomlab/dms_variants Public

    Analyze deep mutational scanning of barcoded variants.

    Jupyter Notebook 8 12

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