Protein language model trained on coding DNA

Python Implementation of Codon Adaption Index

Python package of codon usage bias analysis tools

🌲 a flexible gene expression simulator with codon-specific translation rates

Simple Python program to perform codon optimization or heterology calculations.

Program in R for calculating RSCU.

Codon-based alignment for CDS sequences

CoreTracker, a codon reassignment tracker

MATLAB package for codon usage bias and NGS analysis

Memorize Nirenberg codon mRNA table components with exciting game! 생명과학 2 수능 선택자들을 위한 mRnA 코돈 암기 게임 애플리케이션.

システム上で使用する暗号化システムに、mRNAコドンの仕組みを応用する研究です

Deep Learning LSTM Model for Gene Classification

Extracts all of the possible genes from a string of DNA

CodonScope is an interactive web tool for visualizing and analyzing DNA sequences, translating them into codons, amino acids, and mutations, with a user-friendly interface for genetic sequence analysis.

First public release of the QSOL Unified Field Framework. Includes sexagesimal, trinary, and codon mapping modules, microtonal tuning utilities, and complete Zenodo/QAInN integration. DOI: 10.5281/zenodo.17520187 License: CC BY 4.0 Motto: Small is Beautiful. Fast is Holy. Transparent by Design

An implementation of the Min-Max algorithm to determine the rareness of the codons within a base pair sequence.

Parse codon aminoacids from DNA sequences

Techniques to analyze biological data generated by genome sequencing, proteomics, cell-wide measurements of gene expression changes. Algorithms for single/multiple sequence alignments/assembly. Search algorithms for sequence databases, phylogenetic tree construction algorithms. Algorithms for gene/promoter and protein structure prediction.

A pipeline to do compute and inference using ML tools on codons and DNA

Programs to perform work related to bioinformatics such as counting nucleotides in a DNA string, counting point mutations, and calculating bunny rabbit pairs.