Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 175,000+ scientists worldwide. 163 ready-to-use validated skills plus 100+ scientific databases covering biology, chemistry, medicine, and drug discovery. Compatible with Cursor, Claude Code, Codex, Pi, Antigravity, and the open Agent Skills standard.

Official git repository for Biopython (originally converted from CVS)

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

A versatile pairwise aligner for genomic and spliced nucleotide sequences

Official code repository for GATK versions 4 and up

Data intensive science for everyone.

Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

tools for working with genome variation graphs

A collaboratively written review paper on deep learning, genomics, and precision medicine

🧬 gget enables efficient querying of genomic reference databases

🦖 ClawBio - The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Open. Free.

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Scripts to download genomes from the NCBI FTP servers

Cloud-native genomic dataframes and batch computing

The AI-native health data engine — collect, standardize, and reason over labs, wearables & genomics.

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

A comprehensive tutorial about GWAS and PRS

Python library to facilitate genome assembly, annotation, and comparative genomics

Foundation Models for Genomics & Transcriptomics