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vg vg Public

tools for working with genome variation graphs

C++ 1.3k 219
libbdsg libbdsg Public

Optimized sequence graph implementations for graph genomics

C++ 36 7
libhandlegraph libhandlegraph Public

Library for the Handle Graph abstraction

C++ 25 6
toil-vg toil-vg Public

Distributed and cloud computing framework for vg

Python 23 12

Repositories

Type Language Sort

vg Public
tools for working with genome variation graphs

vgteam/vg's past year of commit activity

C++ 1,334 219 360 (5 issues need help) 22 Updated Aug 28, 2026
dozeu Public Forked from ocxtal/dozeu
SIMD-parallel BLAST X-drop DP on sequence graphs

vgteam/dozeu's past year of commit activity

C 1 8 0 1 Updated Aug 25, 2026
vg_ci_prebake Public
Prebaked Docker image to speed up VG CI

vgteam/vg_ci_prebake's past year of commit activity

Dockerfile 0 MIT 0 0 0 Updated Aug 24, 2026
dind Public Forked from jpetazzo/dind
Docker in Docker

vgteam/dind's past year of commit activity

Shell 0 Apache-2.0 572 0 0 Updated Aug 22, 2026
sdsl-lite Public Forked from simongog/sdsl-lite
Succinct Data Structure Library 2.0

vgteam/sdsl-lite's past year of commit activity

C++ 10 369 0 1 Updated Aug 19, 2026
libhandlegraph Public
Library for the Handle Graph abstraction

vgteam/libhandlegraph's past year of commit activity

C++ 25 MIT 6 15 3 Updated Aug 17, 2026
vg_wdl Public
Workflow Description Language (WDL) scripts for common vg workflows

vgteam/vg_wdl's past year of commit activity

WDL 25 MIT 12 12 3 Updated Aug 12, 2026
giraffe-variant-calling-tests Public Forked from vgteam/long-read-giraffe-experiments
Compare variant calling results across Giraffe versions

vgteam/giraffe-variant-calling-tests's past year of commit activity

Python 0 3 0 0 Updated Aug 11, 2026
libvgio Public
A dynamic library that provides io for the vg toolkit.

vgteam/libvgio's past year of commit activity

C++ 9 12 6 5 Updated Aug 11, 2026
elfutils Public
Mirror of sourceware.org elfutils for vg's deps/elfutils submodule

vgteam/elfutils's past year of commit activity

C 1 GPL-3.0 0 0 0 Updated Jul 27, 2026

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