Bioconductor cheat sheet

Python library to access Gene Expression Omnibus Database (GEO)

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips

R package for normalizing RNA-seq data to make them comparable to microarray data.

Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously

Easy Copy Number !

Cross-platform GUI desktop application for making biological heatmaps

Microarray Analysis Pipeline in Python

analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GEO)

🔬 R package: Analysis of Large Affymetrix Microarray Data Sets

UNet 2.0 - Pytorch implementation of the U-Net 2.0 for image semantic segmentation, with processing blocks for noisy images

Bioinformatics course project - Fall 2020, analysis of genetic expression omnibus (GEO) data series of Acute Myeloid Leukemia

Collection of gene expression datasets

Genomic data manipulation tool

SAGA: Simulated annealing aided genetic algorithm for gene selection from microarray data

Latex scripts to compile my PhD thesis

Deconer: A Comprehensive and Systematic Cell Type Deconvolution Evaluator

R package for visualization of omics data

Temporal Integrative Genomics Analysis in R