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A GTF-native ORF annotation tool for transcriptomes
A rule-based open-reading frame (ORF) prediction tool, built with computation time in mind. Customizable output and search parameters, tested for large datasets and benchmarked for speed and accuracy.
A Python-based tool for analyzing DNA sequences: calculates GC content, reverse complements, and detects non-overlapping open reading frames (ORFs).
SURFA is a Python tool for annotating upstream open reading frames (uORFs) in sequencing data.
Educational six-frame bacterial ORF finder with translation, CLI options, tests, CSV output, and an ORF map.
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