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silva

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pirovc / multitax

Star 52

A Python package for obtaining, parsing and exploring biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)

python taxonomies tree bioinformatics taxonomy ncbi ott silva greengenes gtdb pyhton-library open-tree-taxonomy biological-taxonomies
  • Updated May 5, 2026
  • Python

epruesse / SINA

Star 41

SINA - Reference based multiple sequence alignment

bioinformatics alignment sequence 16s rrna silva
  • Updated Dec 13, 2020
  • C++

SilvaTechB / silva-wave-md

Sponsor
Star 13

SILVA-WAVE-MD is a cutting-edge, multi-purpose WhatsApp bot designed to revolutionize your chat experience. Whether you're looking to manage your groups more effectively, enjoy a variety of entertainment options, or access useful tools and utilities, SILVA-WAVE-MD has got you covered.

whatsapp-web whatsapp-bot silva whatsapp-api whatsapp-chat silva-tech-inc
  • Updated Mar 31, 2025
  • JavaScript

k8hertweck / FieldLabComparison

Star 2

microbiome analysis of ant colonies

r silva microbiome-analysis mothur otu-table
  • Updated Nov 6, 2018
  • Shell

Arkadiy-Garber / Taxonsluice

Star 2

Reference-based, heuristic algorithm for identification of potential contaminants in mothur-formatted OTU tables

amplicon contamination silva otu environmental
  • Updated Apr 20, 2021
  • Python

jungbluth / TaxonomyWelder

Star 2
python bioinformatics taxonomy ncbi silva greengenes gtdb taxonomy-merging
  • Updated Aug 16, 2026
  • Python

SilvaTechB / s-ilva

Sponsor
Star 2

FAST WHATSAPP BOT AND EASY DEPLOY 💃 CREATE BY Silva💜 if it works don't fix it

silva
  • Updated Jul 23, 2024
  • JavaScript

bcgov / nr-silva

Star 2

Natural Resources SILVA Application

react javascript typescript openshift silva bcgov csbc wlrs bcgov-nr bcgov-wlrs
  • Updated Aug 28, 2026
  • Java

GSimas / gustavosimas.com

Star 1

♜Personal Github Webpage

github javascript art css html html5 webpage js templates culture io free page glitch boostrap voltage 404 silva gsimas gustavo
  • Updated Aug 28, 2026
  • TypeScript

Qasim-Hussain-Code / qiime2_antibiotic_microbiome_analysis

Star 1

QIIME 2 pipeline for 16S and ITS amplicon analysis of soil microbiome perturbation under antibiotic stress gradients (PRJEB95045).

bioinformatics microbiome unite its silva antibiotic-resistance microbial-ecology dada2 amplicon-sequencing qiime2 16s-rrna soil-microbiome differential-abundance
  • Updated Aug 4, 2026

aortiz24 / FieldLabComparison

Star 0

microbiome analysis of ant colonies

r silva microbiome-analysis mothur otu-table
  • Updated May 4, 2018
  • Shell

adrianagiongo / RhizoWheat-ms1

Star 0

Workflow and R scripts for Giongo et al. (2024)

r illumina-sequencing silva microbiome-analysis amplicon-sequencing
  • Updated Oct 21, 2024
  • R

qiime-lab / qiime2-manual

Star 0

QIIME 2 による 16S rRNA アンプリコン解析を学ぶための包括的日本語マニュアル — 各手法のメリット・デメリットを解説

documentation bioinformatics japanese microbiome silva dada2 qiime2 16s-rrna
  • Updated Apr 5, 2026
  • R

glickmac / OTU_Groupings

Star 0
workflow microbiome qiime merging silva biom otus greengenes
  • Updated Nov 21, 2017
  • Shell

adrianagiongo / RhizoWheat-ms2

Star 0

Workflow and R scripts for Braun-Kiewnick et al. (2024)

r microbiome wheat silva
  • Updated May 7, 2025
  • R

mmtechslv / PhyloMAF

Star 0

Next Generation Phylogenetic Microbiome Analysis Framework

bioinformatics taxonomy phylogenetic-trees phylogenetics microbiome ott taxonomy-assignment silva microbiome-analysis taxonomic-classification otu-table greengenes 16s-rrna
  • Updated Apr 23, 2022
  • Python

mmtechslv / taxamatcher

Star 0

Correlates target taxonomy(i.e consensus lineages) with a reference taxonomy such as Greengenes, SILVA, etc.

bioinformatics taxonomy metagenomics lineage taxonomy-assignment silva taxonomic-classification taxon taxa greengenes
  • Updated Mar 16, 2021
  • Python

Silvacosta / gustavo

Star 0
html silva
  • Updated Sep 21, 2022
  • HTML

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