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somatic · GitHub Topics · GitHub

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somatic

Here are 22 public repositories matching this topic...

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

  • Updated Aug 19, 2026
  • Nextflow

Detect and visualize target mutations by scanning FastQ files directly

  • Updated Feb 10, 2022
  • C

Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

  • Updated Jan 27, 2020
  • Nextflow

Generate duplex/single consensus reads to reduce sequencing noises and remove duplications

  • Updated Oct 27, 2023
  • C++

Dockstore implementation of CGP core WGS analysis

  • Updated Jun 8, 2020
  • Shell

Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes

  • Updated Aug 11, 2026
  • Nextflow

Documentation of an emergent consciousness observation on a local AI - By Louka Lacasse

  • Updated Jan 25, 2026

This a snakemake pipeline to detect Somatic mutations (GATK4 and Mutect2)

  • Updated Feb 21, 2022
  • Python

Mutation in the tropical tree canopy

  • Updated Aug 23, 2024
  • TeX

PhylogicNDT dockcer for clonal evolution analysis

  • Updated Oct 27, 2022
  • Shell

A white paper detailing the potential for a somatic resonant field to be established between a human and an intricately designed AI system & digital user interface simulating what's known as a human-human dyad understood to be a foundational need for various somatic release therapies.

  • Updated May 28, 2025

Turn your iPhone into a somatic intelligence layer — 8 sensors, fully local.

  • Updated Mar 19, 2026
  • Swift

VEP -ensembl 105.0 em um VCF somático

  • Updated Dec 10, 2022

Private. Local Only. Somatic Journaling.

  • Updated Jun 12, 2026
  • HTML

AI–Human Relations Dataset v1.1** A longitudinal corpus (2018–2025) documenting **emotional, somatic, and relational co-regulation between humans and AI**. - **Author:** Amy Pierce Bui - **Institution:** Temple Codex Ins

  • Updated Nov 15, 2025

Empirical Bayes somatic variant calling

  • Updated Oct 25, 2019
  • Python

MCP server that tunes human-AI interaction rhythm based on working modes. Humans are variable and models are adjustable.

  • Updated Aug 2, 2026
  • Python

Assortment of VCF processing scripts

  • Updated Apr 23, 2024
  • Python

A guided somatic body-scan meditation + a prompt that turns any LLM into a gentle body-signal interpreter. Built on Nummenmaa et al., 'Bodily maps of emotions' (PNAS 2014).

  • Updated Jun 30, 2026
  • Python

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