consensus-sequence
Here are 9 public repositories matching this topic...
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
- Updated Jun 26, 2026
- C
Reference-based consensus creation
- Updated Aug 25, 2026
- Nextflow
Minipoa: A minimizer-based method for fast and memory-efficient partial order alignment
- Updated May 23, 2026
- C++
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
- Updated Jul 20, 2023
- C
Tool for generating influenza A virus genome sequences from FASTQ data
- Updated Jul 22, 2024
- Python
This is a manual for viral amplicon data analysis of Nanopore long reads
- Updated May 4, 2026
- Python
End-to-end SARS-CoV-2 sequence analysis across California, New York, and Texas using notebook workflows.
- Updated Apr 2, 2026
- Jupyter Notebook
A Python project for multiple sequence alignment (MSA) post-processing: consensus sequence calculation, PSSM/profile generation with sequence-logo visualization, plus a small Markov chain simulator.
- Updated Dec 30, 2025
- Python
A python pipeline that brings together tools for generation of consensus sequence, multiple sequence alignment, and phylogenetic analysis.
- Updated Mar 15, 2024
- Python
Improve this page
Add a description, image, and links to the consensus-sequence topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the consensus-sequence topic, visit your repo's landing page and select "manage topics."