Detailed bioinformatics scripts and methods used in the NAM genome paper.

An interactive corn plant point cloud segmentation and annotation software (version 2.0)

ROS package to procedural generate randomized fields with rows of plants for Gazebo

Coctohug - Manage dozens of chia forks mining from a web browser! Nice localization with support of dozens of languages. Runs on Linux, Windows, MacOS, and more...

Workflow to construct linear representation of pan genome from deep WGS data and public assemblies

Characterization of 3D plant development for graminae crops

Structure variants calling and genotyping scripts for pan-Zea

Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment trials" (Fernandes et. al 2024)

A repo contains historical and updated MTEC libraries.

the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics

A comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines

🌿 Shamba AI — AI-powered crop disease detection for Kenyan farmers. Upload a photo, get instant diagnosis, treatment steps & product recommendations. Works on 2G/3G.

Phenotyping Maize over time

The project aims to classify different leaves of crops as disease infected or healthy from its image based on previously calculated average infection percentage of data set of particular disease of a crop.

An imaging library to detect and track future position of ears on maize plants

The repository for codes developed to generated the Maize NC358 assemblies and analyses.

Synthesizing and visualizing the impact of conservation agriculture

bioinformatic utility libraries in python

cropDiffusionR: Exploring the Diffusion of Agricultural Crops